Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.77■□□□□ 0.44
PDLIM4P50479 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM4P50479 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM4P50479 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM4P50479 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM4P50479 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM4P50479 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM4P50479 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM4P50479 TMEM191A-211ENST00000637163 1067 ntBASIC17.77■□□□□ 0.44
PDLIM4P50479 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.77■□□□□ 0.44
PDLIM4P50479 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.77■□□□□ 0.44
PDLIM4P50479 AC068338.2-201ENST00000563278 1430 ntBASIC17.77■□□□□ 0.44
PDLIM4P50479 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM4P50479 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.77■□□□□ 0.43
PDLIM4P50479 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM4P50479 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDLIM4P50479 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM4P50479 AC139530.1-201ENST00000575312 1977 ntBASIC17.77■□□□□ 0.43
PDLIM4P50479 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.76■□□□□ 0.43
PDLIM4P50479 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 MIR4758-201ENST00000577688 71 ntBASIC17.76■□□□□ 0.43
PDLIM4P50479 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM4P50479 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM4P50479 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM4P50479 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM4P50479 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.75■□□□□ 0.43
PDLIM4P50479 AC073210.2-201ENST00000430369 194 ntBASIC17.75■□□□□ 0.43
PDLIM4P50479 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.75■□□□□ 0.43
PDLIM4P50479 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM4P50479 OR10C1-204ENST00000622521 1039 ntBASIC17.75■□□□□ 0.43
PDLIM4P50479 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM4P50479 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.75■□□□□ 0.43
PDLIM4P50479 MKRN4P-201ENST00000444706 1521 ntBASIC17.75■□□□□ 0.43
PDLIM4P50479 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.75■□□□□ 0.43
PDLIM4P50479 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDLIM4P50479 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM4P50479 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM4P50479 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PDLIM4P50479 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.74■□□□□ 0.43
PDLIM4P50479 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM4P50479 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.74■□□□□ 0.43
PDLIM4P50479 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.74■□□□□ 0.43
PDLIM4P50479 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
PDLIM4P50479 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM4P50479 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.74■□□□□ 0.43
PDLIM4P50479 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.74■□□□□ 0.43
PDLIM4P50479 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM4P50479 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM4P50479 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM4P50479 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM4P50479 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM4P50479 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM4P50479 KRT16P2-201ENST00000414673 1423 ntBASIC17.73■□□□□ 0.43
PDLIM4P50479 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM4P50479 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM4P50479 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM4P50479 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PDLIM4P50479 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms