Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SSR2P43308 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSR2P43308 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SSR2P43308 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.98■□□□□ 0.79
SSR2P43308 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.98■□□□□ 0.79
SSR2P43308 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR2P43308 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR2P43308 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.98■□□□□ 0.79
SSR2P43308 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR2P43308 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.98■□□□□ 0.79
SSR2P43308 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.98■□□□□ 0.79
SSR2P43308 MIR6821-201ENST00000617625 74 ntBASIC19.98■□□□□ 0.79
SSR2P43308 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SSR2P43308 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SSR2P43308 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR2P43308 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR2P43308 AF106564.1-201ENST00000607058 2553 ntBASIC19.97■□□□□ 0.79
SSR2P43308 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR2P43308 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR2P43308 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SSR2P43308 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.97■□□□□ 0.79
SSR2P43308 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR2P43308 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR2P43308 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.97■□□□□ 0.79
SSR2P43308 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR2P43308 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.97■□□□□ 0.79
SSR2P43308 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.97■□□□□ 0.79
SSR2P43308 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L2-201ENST00000561772 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 AC138907.5-202ENST00000569484 235 ntBASIC19.97■□□□□ 0.79
SSR2P43308 AC104187.1-201ENST00000607510 612 ntBASIC19.97■□□□□ 0.79
SSR2P43308 AC008175.2-201ENST00000612840 297 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L6-201ENST00000626483 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L1-201ENST00000627662 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L8-201ENST00000629013 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L3-201ENST00000630187 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L7-201ENST00000630678 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 DUX4L5-201ENST00000630834 1275 ntBASIC19.97■□□□□ 0.79
SSR2P43308 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR2P43308 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SSR2P43308 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 AC004854.2-201ENST00000608450 1441 ntBASIC19.96■□□□□ 0.79
SSR2P43308 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 AC034268.1-201ENST00000441047 882 ntBASIC19.96■□□□□ 0.79
SSR2P43308 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR2P43308 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR2P43308 AC087623.3-201ENST00000607047 1098 ntBASIC19.96■□□□□ 0.79
SSR2P43308 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSR2P43308 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSR2P43308 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSR2P43308 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSR2P43308 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSR2P43308 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR2P43308 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.95■□□□□ 0.78
SSR2P43308 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSR2P43308 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR2P43308 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR2P43308 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR2P43308 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR2P43308 RARRES2P6-201ENST00000567333 442 ntBASIC19.95■□□□□ 0.78
SSR2P43308 AC005229.4-201ENST00000610085 2198 ntBASIC19.95■□□□□ 0.78
SSR2P43308 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR2P43308 AC061975.6-201ENST00000579045 1553 ntBASIC19.95■□□□□ 0.78
SSR2P43308 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.94■□□□□ 0.78
SSR2P43308 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SSR2P43308 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 AC010141.2-201ENST00000452426 721 ntBASIC19.94■□□□□ 0.78
SSR2P43308 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SSR2P43308 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.94■□□□□ 0.78
SSR2P43308 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.94■□□□□ 0.78
SSR2P43308 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR2P43308 AP004607.4-201ENST00000530158 1459 ntBASIC19.93■□□□□ 0.78
SSR2P43308 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.93■□□□□ 0.78
SSR2P43308 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SSR2P43308 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms