Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.9■■□□□ 1.42
HTTP42858 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.89■■□□□ 1.42
HTTP42858 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
HTTP42858 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.89■■□□□ 1.42
HTTP42858 AL353708.3-201ENST00000610272 989 ntBASIC23.89■■□□□ 1.42
HTTP42858 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HTTP42858 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
HTTP42858 AC142381.3-201ENST00000568208 1670 ntBASIC23.89■■□□□ 1.41
HTTP42858 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HTTP42858 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.89■■□□□ 1.41
HTTP42858 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.89■■□□□ 1.41
HTTP42858 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.89■■□□□ 1.41
HTTP42858 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.88■■□□□ 1.41
HTTP42858 POM121L13P-201ENST00000422362 380 ntBASIC23.88■■□□□ 1.41
HTTP42858 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.88■■□□□ 1.41
HTTP42858 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
HTTP42858 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.88■■□□□ 1.41
HTTP42858 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 KRT17P3-201ENST00000420566 1262 ntBASIC23.88■■□□□ 1.41
HTTP42858 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.88■■□□□ 1.41
HTTP42858 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.88■■□□□ 1.41
HTTP42858 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.88■■□□□ 1.41
HTTP42858 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HTTP42858 AC092865.7-201ENST00000641832 219 ntBASIC23.88■■□□□ 1.41
HTTP42858 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.87■■□□□ 1.41
HTTP42858 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.87■■□□□ 1.41
HTTP42858 ARMC10P1-201ENST00000313754 855 ntBASIC23.87■■□□□ 1.41
HTTP42858 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.87■■□□□ 1.41
HTTP42858 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.87■■□□□ 1.41
HTTP42858 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.87■■□□□ 1.41
HTTP42858 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HTTP42858 AC061975.6-201ENST00000579045 1553 ntBASIC23.87■■□□□ 1.41
HTTP42858 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HTTP42858 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.87■■□□□ 1.41
HTTP42858 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.87■■□□□ 1.41
HTTP42858 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.86■■□□□ 1.41
HTTP42858 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.86■■□□□ 1.41
HTTP42858 MTDHP1-201ENST00000605323 784 ntBASIC23.86■■□□□ 1.41
HTTP42858 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.86■■□□□ 1.41
HTTP42858 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.86■■□□□ 1.41
HTTP42858 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
HTTP42858 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
HTTP42858 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.86■■□□□ 1.41
HTTP42858 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.86■■□□□ 1.41
HTTP42858 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HTTP42858 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
HTTP42858 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTTP42858 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.86■■□□□ 1.41
HTTP42858 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.85■■□□□ 1.41
HTTP42858 AC124016.1-201ENST00000609552 612 ntBASIC23.85■■□□□ 1.41
HTTP42858 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.85■■□□□ 1.41
HTTP42858 POU5F1P4-201ENST00000413175 1085 ntBASIC23.85■■□□□ 1.41
HTTP42858 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.85■■□□□ 1.41
HTTP42858 AC145285.6-201ENST00000604632 637 ntBASIC23.85■■□□□ 1.41
HTTP42858 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HTTP42858 KRT17P2-201ENST00000300992 1314 ntBASIC23.85■■□□□ 1.41
HTTP42858 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.85■■□□□ 1.41
HTTP42858 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.84■■□□□ 1.41
HTTP42858 AC100791.3-201ENST00000617619 330 ntBASIC23.84■■□□□ 1.41
HTTP42858 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.84■■□□□ 1.41
HTTP42858 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.84■■□□□ 1.41
HTTP42858 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HTTP42858 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.84■■□□□ 1.41
HTTP42858 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.84■■□□□ 1.41
HTTP42858 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.84■■□□□ 1.41
HTTP42858 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.83■■□□□ 1.41
HTTP42858 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
HTTP42858 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.83■■□□□ 1.41
HTTP42858 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTTP42858 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
HTTP42858 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.83■■□□□ 1.4
HTTP42858 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
HTTP42858 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
HTTP42858 OR7E47P-201ENST00000546390 1422 ntBASIC23.83■■□□□ 1.4
HTTP42858 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.83■■□□□ 1.4
HTTP42858 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HTTP42858 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
HTTP42858 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
HTTP42858 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HTTP42858 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HTTP42858 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.82■■□□□ 1.4
HTTP42858 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms