Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CLDN5-201ENST00000403084 2357 ntBASIC21.9■■□□□ 1.1
SCNN1AP37088 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.9■■□□□ 1.1
SCNN1AP37088 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SCNN1AP37088 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SCNN1AP37088 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.89■■□□□ 1.09
SCNN1AP37088 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.89■■□□□ 1.09
SCNN1AP37088 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCNN1AP37088 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCNN1AP37088 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCNN1AP37088 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCNN1AP37088 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCNN1AP37088 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SCNN1AP37088 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.88■■□□□ 1.09
SCNN1AP37088 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.88■■□□□ 1.09
SCNN1AP37088 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.88■■□□□ 1.09
SCNN1AP37088 AC243732.1-201ENST00000612648 864 ntBASIC21.88■■□□□ 1.09
SCNN1AP37088 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCNN1AP37088 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SCNN1AP37088 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SCNN1AP37088 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.87■■□□□ 1.09
SCNN1AP37088 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SCNN1AP37088 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.87■■□□□ 1.09
SCNN1AP37088 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.87■■□□□ 1.09
SCNN1AP37088 MIR935-201ENST00000401179 91 ntBASIC21.87■■□□□ 1.09
SCNN1AP37088 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SCNN1AP37088 KRT18P11-201ENST00000435214 1283 ntBASIC21.87■■□□□ 1.09
SCNN1AP37088 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.87■■□□□ 1.09
SCNN1AP37088 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.87■■□□□ 1.09
SCNN1AP37088 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.87■■□□□ 1.09
SCNN1AP37088 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SCNN1AP37088 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SCNN1AP37088 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCNN1AP37088 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.87■■□□□ 1.09
SCNN1AP37088 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.86■■□□□ 1.09
SCNN1AP37088 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.86■■□□□ 1.09
SCNN1AP37088 AC245052.3-201ENST00000450182 901 ntBASIC21.86■■□□□ 1.09
SCNN1AP37088 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.86■■□□□ 1.09
SCNN1AP37088 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SCNN1AP37088 RARRES2P11-201ENST00000635158 484 ntBASIC21.86■■□□□ 1.09
SCNN1AP37088 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SCNN1AP37088 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.86■■□□□ 1.09
SCNN1AP37088 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SCNN1AP37088 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SCNN1AP37088 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.85■■□□□ 1.09
SCNN1AP37088 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.85■■□□□ 1.09
SCNN1AP37088 UBE2DNL-204ENST00000602536 740 ntBASIC21.85■■□□□ 1.09
SCNN1AP37088 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.85■■□□□ 1.09
SCNN1AP37088 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.85■■□□□ 1.09
SCNN1AP37088 MYCNOS-205ENST00000641950 531 ntBASIC21.85■■□□□ 1.09
SCNN1AP37088 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.85■■□□□ 1.09
SCNN1AP37088 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCNN1AP37088 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.85■■□□□ 1.09
SCNN1AP37088 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.85■■□□□ 1.09
SCNN1AP37088 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.84■■□□□ 1.09
SCNN1AP37088 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SCNN1AP37088 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.84■■□□□ 1.09
SCNN1AP37088 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.84■■□□□ 1.09
SCNN1AP37088 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.84■■□□□ 1.09
SCNN1AP37088 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.84■■□□□ 1.09
SCNN1AP37088 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCNN1AP37088 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.83■■□□□ 1.09
SCNN1AP37088 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.83■■□□□ 1.09
SCNN1AP37088 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.83■■□□□ 1.09
SCNN1AP37088 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCNN1AP37088 AC006015.1-201ENST00000429970 570 ntBASIC21.83■■□□□ 1.09
SCNN1AP37088 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.83■■□□□ 1.09
SCNN1AP37088 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.83■■□□□ 1.09
SCNN1AP37088 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.83■■□□□ 1.09
SCNN1AP37088 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.83■■□□□ 1.09
SCNN1AP37088 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms