Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM23P36406 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM23P36406 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.91
TRIM23P36406 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.91
TRIM23P36406 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM23P36406 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM23P36406 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM23P36406 AL591742.1-201ENST00000604433 565 ntBASIC20.7■□□□□ 0.9
TRIM23P36406 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM23P36406 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM23P36406 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM23P36406 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM23P36406 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM23P36406 CYP2T1P-201ENST00000432607 1285 ntBASIC20.69■□□□□ 0.9
TRIM23P36406 AC142086.2-201ENST00000569753 217 ntBASIC20.69■□□□□ 0.9
TRIM23P36406 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM23P36406 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM23P36406 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM23P36406 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM23P36406 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRIM23P36406 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM23P36406 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM23P36406 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM23P36406 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM23P36406 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM23P36406 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM23P36406 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM23P36406 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM23P36406 OR10C1-204ENST00000622521 1039 ntBASIC20.68■□□□□ 0.9
TRIM23P36406 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM23P36406 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM23P36406 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM23P36406 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM23P36406 AL512625.2-201ENST00000417533 625 ntBASIC20.67■□□□□ 0.9
TRIM23P36406 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM23P36406 AC105036.2-201ENST00000569468 176 ntBASIC20.67■□□□□ 0.9
TRIM23P36406 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRIM23P36406 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM23P36406 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM23P36406 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM23P36406 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM23P36406 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM23P36406 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM23P36406 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM23P36406 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM23P36406 AC245052.3-201ENST00000450182 901 ntBASIC20.66■□□□□ 0.9
TRIM23P36406 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM23P36406 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM23P36406 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM23P36406 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM23P36406 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM23P36406 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM23P36406 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM23P36406 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM23P36406 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM23P36406 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM23P36406 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM23P36406 AC091799.1-201ENST00000422823 811 ntBASIC20.65■□□□□ 0.9
TRIM23P36406 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM23P36406 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIM23P36406 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM23P36406 AC069236.1-201ENST00000604339 616 ntBASIC20.65■□□□□ 0.9
TRIM23P36406 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIM23P36406 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM23P36406 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms