Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VCLP18206 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.01■□□□□ 0.95
VCLP18206 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.01■□□□□ 0.95
VCLP18206 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.01■□□□□ 0.95
VCLP18206 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VCLP18206 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
VCLP18206 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.01■□□□□ 0.95
VCLP18206 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.01■□□□□ 0.95
VCLP18206 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.01■□□□□ 0.95
VCLP18206 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
VCLP18206 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VCLP18206 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.01■□□□□ 0.95
VCLP18206 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21■□□□□ 0.95
VCLP18206 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 AC055733.4-201ENST00000638462 1354 ntBASIC21■□□□□ 0.95
VCLP18206 AP006587.3-201ENST00000525742 1516 ntBASIC21■□□□□ 0.95
VCLP18206 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21■□□□□ 0.95
VCLP18206 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21■□□□□ 0.95
VCLP18206 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21■□□□□ 0.95
VCLP18206 GXYLT1P2-201ENST00000433312 1230 ntBASIC21■□□□□ 0.95
VCLP18206 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21■□□□□ 0.95
VCLP18206 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21■□□□□ 0.95
VCLP18206 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VCLP18206 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21■□□□□ 0.95
VCLP18206 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VCLP18206 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21■□□□□ 0.95
VCLP18206 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21■□□□□ 0.95
VCLP18206 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 RNF165-205ENST00000588679 2904 ntBASIC21■□□□□ 0.95
VCLP18206 KRT87P-202ENST00000534226 1464 ntBASIC21■□□□□ 0.95
VCLP18206 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCLP18206 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21■□□□□ 0.95
VCLP18206 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
VCLP18206 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
VCLP18206 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VCLP18206 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.99■□□□□ 0.95
VCLP18206 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.99■□□□□ 0.95
VCLP18206 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.99■□□□□ 0.95
VCLP18206 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.99■□□□□ 0.95
VCLP18206 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
VCLP18206 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.99■□□□□ 0.95
VCLP18206 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCLP18206 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCLP18206 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.98■□□□□ 0.95
VCLP18206 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
VCLP18206 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCLP18206 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCLP18206 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VCLP18206 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.98■□□□□ 0.95
VCLP18206 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VCLP18206 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.98■□□□□ 0.95
VCLP18206 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCLP18206 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VCLP18206 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.97■□□□□ 0.95
VCLP18206 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.97■□□□□ 0.95
VCLP18206 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.97■□□□□ 0.95
VCLP18206 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
VCLP18206 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.97■□□□□ 0.95
VCLP18206 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.97■□□□□ 0.95
VCLP18206 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.97■□□□□ 0.95
VCLP18206 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCLP18206 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VCLP18206 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
VCLP18206 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.96■□□□□ 0.95
VCLP18206 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VCLP18206 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.96■□□□□ 0.95
VCLP18206 KRT19P1-201ENST00000405746 1186 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms