Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL6A2P12110 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL6A2P12110 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
COL6A2P12110 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL6A2P12110 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL6A2P12110 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.7■□□□□ 0.9
COL6A2P12110 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.7■□□□□ 0.9
COL6A2P12110 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL6A2P12110 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL6A2P12110 AC005224.4-201ENST00000583262 1652 ntBASIC20.7■□□□□ 0.9
COL6A2P12110 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL6A2P12110 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
COL6A2P12110 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.69■□□□□ 0.9
COL6A2P12110 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.69■□□□□ 0.9
COL6A2P12110 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
COL6A2P12110 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL6A2P12110 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.69■□□□□ 0.9
COL6A2P12110 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 GABARAPL3-202ENST00000624044 1851 ntBASIC20.69■□□□□ 0.9
COL6A2P12110 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL6A2P12110 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL6A2P12110 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL6A2P12110 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COL6A2P12110 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL6A2P12110 AC092667.1-201ENST00000434301 2586 ntBASIC20.68■□□□□ 0.9
COL6A2P12110 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
COL6A2P12110 AC121338.2-201ENST00000622535 1744 ntBASIC20.68■□□□□ 0.9
COL6A2P12110 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.68■□□□□ 0.9
COL6A2P12110 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL6A2P12110 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.68■□□□□ 0.9
COL6A2P12110 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL6A2P12110 AC105233.4-201ENST00000642045 216 ntBASIC20.68■□□□□ 0.9
COL6A2P12110 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
COL6A2P12110 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL6A2P12110 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL6A2P12110 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL6A2P12110 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL6A2P12110 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.67■□□□□ 0.9
COL6A2P12110 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
COL6A2P12110 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.67■□□□□ 0.9
COL6A2P12110 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.67■□□□□ 0.9
COL6A2P12110 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.67■□□□□ 0.9
COL6A2P12110 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.67■□□□□ 0.9
COL6A2P12110 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.67■□□□□ 0.9
COL6A2P12110 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL6A2P12110 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
COL6A2P12110 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COL6A2P12110 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL6A2P12110 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL6A2P12110 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL6A2P12110 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL6A2P12110 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
COL6A2P12110 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
COL6A2P12110 BX005040.4-201ENST00000637145 1518 ntBASIC20.66■□□□□ 0.9
COL6A2P12110 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.66■□□□□ 0.9
COL6A2P12110 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.66■□□□□ 0.9
COL6A2P12110 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL6A2P12110 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.66■□□□□ 0.9
COL6A2P12110 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
COL6A2P12110 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL6A2P12110 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
COL6A2P12110 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL6A2P12110 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL6A2P12110 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL6A2P12110 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL6A2P12110 AP005212.1-201ENST00000581547 1997 ntBASIC20.65■□□□□ 0.9
COL6A2P12110 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL6A2P12110 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
COL6A2P12110 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms