Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
RPL40BP0CH09 TOF1YNL273W 3717 nt2.01□□□□□ -2.09
RPL40BP0CH09 NUP192YJL039C 5052 nt2□□□□□ -2.09
RPL40BP0CH09 SSD1YDR293C 3753 nt2□□□□□ -2.09
RPL40BP0CH09 PHR1YOR386W 1698 nt2□□□□□ -2.09
RPL40BP0CH09 DOS2YDR068W 933 nt2□□□□□ -2.09
RPL40BP0CH09 HPA3YEL066W 540 nt2□□□□□ -2.09
RPL40BP0CH09 SMX2YFL017W-A 234 nt2□□□□□ -2.09
RPL40BP0CH09 MRPL33YMR286W 261 nt2□□□□□ -2.09
RPL40BP0CH09 RFC5YBR087W 1065 nt2□□□□□ -2.09
RPL40BP0CH09 NFI1YOR156C 2181 nt2□□□□□ -2.09
RPL40BP0CH09 CIN1YOR349W 3045 nt2□□□□□ -2.09
RPL40BP0CH09 DUG2YBR281C 2637 nt2□□□□□ -2.09
RPL40BP0CH09 AI2Q0055 2565 nt1.99□□□□□ -2.09
RPL40BP0CH09 BUD30YDL151C 582 nt1.99□□□□□ -2.09
RPL40BP0CH09 YHL045WYHL045W 348 nt1.99□□□□□ -2.09
RPL40BP0CH09 YKL131WYKL131W 522 nt1.99□□□□□ -2.09
RPL40BP0CH09 YAL059C-AYAL059C-A 423 nt1.99□□□□□ -2.09
RPL40BP0CH09 ISU1YPL135W 498 nt1.99□□□□□ -2.09
RPL40BP0CH09 SEC16YPL085W 6588 nt1.99□□□□□ -2.09
RPL40BP0CH09 SAP185YJL098W 3177 nt1.99□□□□□ -2.09
RPL40BP0CH09 RPL27BYDR471W 411 nt1.98□□□□□ -2.09
RPL40BP0CH09 SMT3YDR510W 306 nt1.98□□□□□ -2.09
RPL40BP0CH09 PCL7YIL050W 858 nt1.98□□□□□ -2.09
RPL40BP0CH09 SHE3YBR130C 1278 nt1.98□□□□□ -2.09
RPL40BP0CH09 GEA1YJR031C 4227 nt1.98□□□□□ -2.09
RPL40BP0CH09 YJL181WYJL181W 1836 nt1.98□□□□□ -2.09
RPL40BP0CH09 DIA2YOR080W 2199 nt1.98□□□□□ -2.09
RPL40BP0CH09 CWC22YGR278W 1734 nt1.97□□□□□ -2.09
RPL40BP0CH09 PHO2YDL106C 1680 nt1.97□□□□□ -2.09
RPL40BP0CH09 YGL014C-AYGL014C-A 162 nt1.97□□□□□ -2.09
RPL40BP0CH09 YGR160WYGR160W 612 nt1.97□□□□□ -2.09
RPL40BP0CH09 SPO12YHR152W 522 nt1.97□□□□□ -2.09
RPL40BP0CH09 ISF1YMR081C 1017 nt1.97□□□□□ -2.09
RPL40BP0CH09 YBL055CYBL055C 1257 nt1.97□□□□□ -2.09
RPL40BP0CH09 YNL109WYNL109W 546 nt1.97□□□□□ -2.09
RPL40BP0CH09 MPD2YOL088C 834 nt1.97□□□□□ -2.09
RPL40BP0CH09 HRD3YLR207W 2502 nt1.97□□□□□ -2.09
RPL40BP0CH09 CLN3YAL040C 1743 nt1.97□□□□□ -2.09
RPL40BP0CH09 SAK1YER129W 3429 nt1.97□□□□□ -2.09
RPL40BP0CH09 SOK2YMR016C 2358 nt1.96□□□□□ -2.09
RPL40BP0CH09 RNY1YPL123C 1305 nt1.96□□□□□ -2.1
RPL40BP0CH09 YPR148CYPR148C 1308 nt1.96□□□□□ -2.1
RPL40BP0CH09 SRO9YCL037C 1305 nt1.96□□□□□ -2.1
RPL40BP0CH09 RKM4YDR257C 1485 nt1.96□□□□□ -2.1
RPL40BP0CH09 SBE22YHR103W 2559 nt1.96□□□□□ -2.1
RPL40BP0CH09 SIP18YMR175W 240 nt1.96□□□□□ -2.1
RPL40BP0CH09 RPL20AYMR242C 519 nt1.96□□□□□ -2.1
RPL40BP0CH09 SSN2YDR443C 4263 nt1.96□□□□□ -2.1
RPL40BP0CH09 PKH3YDR466W 2697 nt1.96□□□□□ -2.1
RPL40BP0CH09 SEY1YOR165W 2331 nt1.96□□□□□ -2.1
RPL40BP0CH09 SIR3YLR442C 2937 nt1.96□□□□□ -2.1
RPL40BP0CH09 BNI1YNL271C 5862 nt1.96□□□□□ -2.1
RPL40BP0CH09 SMY2YBR172C 2223 nt1.95□□□□□ -2.1
RPL40BP0CH09 DSE4YNR067C 3354 nt1.95□□□□□ -2.1
RPL40BP0CH09 INO80YGL150C 4470 nt1.95□□□□□ -2.1
RPL40BP0CH09 YKU80YMR106C 1890 nt1.95□□□□□ -2.1
RPL40BP0CH09 UTP14YML093W 2700 nt1.95□□□□□ -2.1
RPL40BP0CH09 SPO77YLR341W 1434 nt1.95□□□□□ -2.1
RPL40BP0CH09 YDL041WYDL041W 354 nt1.95□□□□□ -2.1
RPL40BP0CH09 ADK1YDR226W 669 nt1.95□□□□□ -2.1
RPL40BP0CH09 CGR1YGL029W 363 nt1.95□□□□□ -2.1
RPL40BP0CH09 YHR210CYHR210C 1026 nt1.95□□□□□ -2.1
RPL40BP0CH09 YKL177WYKL177W 339 nt1.95□□□□□ -2.1
RPL40BP0CH09 GCY1YOR120W 939 nt1.95□□□□□ -2.1
RPL40BP0CH09 SPP41YDR464W 4308 nt1.95□□□□□ -2.1
RPL40BP0CH09 PEP1YBL017C 4740 nt1.95□□□□□ -2.1
RPL40BP0CH09 YCK2YNL154C 1641 nt1.95□□□□□ -2.1
RPL40BP0CH09 PMD1YER132C 5262 nt1.95□□□□□ -2.1
RPL40BP0CH09 VIP1YLR410W 3441 nt1.94□□□□□ -2.1
RPL40BP0CH09 MIP6YHR015W 1980 nt1.94□□□□□ -2.1
RPL40BP0CH09 TAE2YPL009C 3117 nt1.94□□□□□ -2.1
RPL40BP0CH09 IMG2YCR071C 441 nt1.94□□□□□ -2.1
RPL40BP0CH09 PHO92YDR374C 921 nt1.94□□□□□ -2.1
RPL40BP0CH09 EFG1YGR271C-A 702 nt1.94□□□□□ -2.1
RPL40BP0CH09 YUH1YJR099W 711 nt1.94□□□□□ -2.1
RPL40BP0CH09 YKL165C-AYKL165C-A 234 nt1.94□□□□□ -2.1
RPL40BP0CH09 RPL25YOL127W 429 nt1.94□□□□□ -2.1
RPL40BP0CH09 SHE4YOR035C 2370 nt1.94□□□□□ -2.1
RPL40BP0CH09 PAC1YOR269W 1485 nt1.94□□□□□ -2.1
RPL40BP0CH09 BNI4YNL233W 2679 nt1.94□□□□□ -2.1
RPL40BP0CH09 AI5_BETAQ0075 1065 nt1.93□□□□□ -2.1
RPL40BP0CH09 IZH1YDR492W 951 nt1.93□□□□□ -2.1
RPL40BP0CH09 THO1YER063W 657 nt1.93□□□□□ -2.1
RPL40BP0CH09 AML1YGR001C 747 nt1.93□□□□□ -2.1
RPL40BP0CH09 YLR363W-AYLR363W-A 258 nt1.93□□□□□ -2.1
RPL40BP0CH09 ATG19YOL082W 1248 nt1.93□□□□□ -2.1
RPL40BP0CH09 HNT3YOR258W 654 nt1.93□□□□□ -2.1
RPL40BP0CH09 YSA1YBR111C 696 nt1.93□□□□□ -2.1
RPL40BP0CH09 PUS9YDL036C 1389 nt1.93□□□□□ -2.1
RPL40BP0CH09 TFC3YAL001C 3483 nt1.93□□□□□ -2.1
RPL40BP0CH09 HSL1YKL101W 4557 nt1.93□□□□□ -2.1
RPL40BP0CH09 KOG1YHR186C 4674 nt1.93□□□□□ -2.1
RPL40BP0CH09 GAL80YML051W 1308 nt1.92□□□□□ -2.1
RPL40BP0CH09 TIF35YDR429C 825 nt1.92□□□□□ -2.1
RPL40BP0CH09 GRX2YDR513W 432 nt1.92□□□□□ -2.1
RPL40BP0CH09 YGL024WYGL024W 336 nt1.92□□□□□ -2.1
RPL40BP0CH09 PEX14YGL153W 1026 nt1.92□□□□□ -2.1
RPL40BP0CH09 AAH1YNL141W 1044 nt1.92□□□□□ -2.1
RPL40BP0CH09 YNL184CYNL184C 327 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 45 ms