Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MMP2P08253 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP2P08253 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP2P08253 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.18■□□□□ 0.98
MMP2P08253 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
MMP2P08253 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
MMP2P08253 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MMP2P08253 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
MMP2P08253 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP2P08253 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP2P08253 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP2P08253 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP2P08253 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP2P08253 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.17■□□□□ 0.98
MMP2P08253 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP2P08253 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MMP2P08253 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP2P08253 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP2P08253 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP2P08253 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP2P08253 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 KRT18P20-201ENST00000548986 1279 ntBASIC21.16■□□□□ 0.98
MMP2P08253 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP2P08253 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
MMP2P08253 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP2P08253 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP2P08253 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MMP2P08253 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MMP2P08253 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP2P08253 KRT16P2-201ENST00000414673 1423 ntBASIC21.15■□□□□ 0.98
MMP2P08253 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
MMP2P08253 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP2P08253 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.15■□□□□ 0.98
MMP2P08253 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP2P08253 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.15■□□□□ 0.98
MMP2P08253 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP2P08253 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP2P08253 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.14■□□□□ 0.98
MMP2P08253 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
MMP2P08253 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP2P08253 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP2P08253 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP2P08253 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MMP2P08253 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP2P08253 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP2P08253 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP2P08253 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP2P08253 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP2P08253 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP2P08253 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP2P08253 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP2P08253 UBE2DNL-204ENST00000602536 740 ntBASIC21.14■□□□□ 0.97
MMP2P08253 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP2P08253 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
MMP2P08253 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.14■□□□□ 0.97
MMP2P08253 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP2P08253 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
MMP2P08253 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MMP2P08253 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP2P08253 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP2P08253 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP2P08253 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP2P08253 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.13■□□□□ 0.97
MMP2P08253 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.13■□□□□ 0.97
MMP2P08253 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.13■□□□□ 0.97
MMP2P08253 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP2P08253 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP2P08253 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP2P08253 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP2P08253 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP2P08253 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MMP2P08253 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP2P08253 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms