Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.25■□□□□ 0.99
SRPRAP08240 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SRPRAP08240 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.25■□□□□ 0.99
SRPRAP08240 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.24■□□□□ 0.99
SRPRAP08240 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SRPRAP08240 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.24■□□□□ 0.99
SRPRAP08240 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.24■□□□□ 0.99
SRPRAP08240 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.24■□□□□ 0.99
SRPRAP08240 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SRPRAP08240 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPRAP08240 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.23■□□□□ 0.99
SRPRAP08240 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.23■□□□□ 0.99
SRPRAP08240 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.23■□□□□ 0.99
SRPRAP08240 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.23■□□□□ 0.99
SRPRAP08240 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.23■□□□□ 0.99
SRPRAP08240 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.23■□□□□ 0.99
SRPRAP08240 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SRPRAP08240 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SRPRAP08240 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SRPRAP08240 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
SRPRAP08240 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPRAP08240 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.22■□□□□ 0.99
SRPRAP08240 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SRPRAP08240 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRPRAP08240 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SRPRAP08240 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPRAP08240 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.22■□□□□ 0.99
SRPRAP08240 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SRPRAP08240 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SRPRAP08240 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 MKRN4P-201ENST00000444706 1521 ntBASIC21.21■□□□□ 0.99
SRPRAP08240 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 AL138781.1-201ENST00000566567 1274 ntBASIC21.21■□□□□ 0.99
SRPRAP08240 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRPRAP08240 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
SRPRAP08240 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SRPRAP08240 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.2■□□□□ 0.98
SRPRAP08240 AC091799.1-201ENST00000422823 811 ntBASIC21.2■□□□□ 0.98
SRPRAP08240 AC073210.2-201ENST00000430369 194 ntBASIC21.2■□□□□ 0.98
SRPRAP08240 RARRES2P4-201ENST00000514074 484 ntBASIC21.2■□□□□ 0.98
SRPRAP08240 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.2■□□□□ 0.98
SRPRAP08240 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.2■□□□□ 0.98
SRPRAP08240 AC016405.3-201ENST00000607710 860 ntBASIC21.2■□□□□ 0.98
SRPRAP08240 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.2■□□□□ 0.98
SRPRAP08240 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.2■□□□□ 0.98
SRPRAP08240 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SRPRAP08240 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SRPRAP08240 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.19■□□□□ 0.98
SRPRAP08240 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
SRPRAP08240 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
SRPRAP08240 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SRPRAP08240 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.19■□□□□ 0.98
SRPRAP08240 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.19■□□□□ 0.98
SRPRAP08240 AC133041.1-202ENST00000642053 222 ntBASIC21.19■□□□□ 0.98
SRPRAP08240 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.19■□□□□ 0.98
SRPRAP08240 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.19■□□□□ 0.98
SRPRAP08240 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.19■□□□□ 0.98
SRPRAP08240 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRPRAP08240 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 AC069152.1-201ENST00000438030 544 ntBASIC21.18■□□□□ 0.98
SRPRAP08240 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.18■□□□□ 0.98
SRPRAP08240 AC093787.1-201ENST00000450396 207 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms