Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CTSDP07339 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSDP07339 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.38■□□□□ 0.37
CTSDP07339 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSDP07339 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 TSPY9P-201ENST00000440215 945 ntBASIC17.38■□□□□ 0.37
CTSDP07339 TSPY11P-201ENST00000442607 1045 ntBASIC17.38■□□□□ 0.37
CTSDP07339 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSDP07339 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSDP07339 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 AC027702.1-201ENST00000563810 1770 ntBASIC17.38■□□□□ 0.37
CTSDP07339 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSDP07339 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CTSDP07339 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSDP07339 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTSDP07339 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.37■□□□□ 0.37
CTSDP07339 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSDP07339 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSDP07339 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSDP07339 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTSDP07339 MIR6724-1-201ENST00000616420 92 ntBASIC17.37■□□□□ 0.37
CTSDP07339 MIR6724-2-201ENST00000616483 92 ntBASIC17.37■□□□□ 0.37
CTSDP07339 MIR6724-4-201ENST00000617390 92 ntBASIC17.37■□□□□ 0.37
CTSDP07339 MIR6724-3-201ENST00000622482 92 ntBASIC17.37■□□□□ 0.37
CTSDP07339 AC121338.2-201ENST00000622535 1744 ntBASIC17.37■□□□□ 0.37
CTSDP07339 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSDP07339 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSDP07339 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSDP07339 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CTSDP07339 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSDP07339 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSDP07339 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSDP07339 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.36■□□□□ 0.37
CTSDP07339 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSDP07339 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.36■□□□□ 0.37
CTSDP07339 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSDP07339 AC239859.2-201ENST00000444165 318 ntBASIC17.36■□□□□ 0.37
CTSDP07339 MIR3181-201ENST00000578512 73 ntBASIC17.36■□□□□ 0.37
CTSDP07339 AC099791.2-201ENST00000605725 427 ntBASIC17.36■□□□□ 0.37
CTSDP07339 AC020907.5-201ENST00000624372 1936 ntBASIC17.36■□□□□ 0.37
CTSDP07339 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTSDP07339 AP006587.3-201ENST00000525742 1516 ntBASIC17.36■□□□□ 0.37
CTSDP07339 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSDP07339 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTSDP07339 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSDP07339 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTSDP07339 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CTSDP07339 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 AL035685.1-201ENST00000636663 812 ntBASIC17.35■□□□□ 0.37
CTSDP07339 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSDP07339 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSDP07339 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSDP07339 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTSDP07339 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSDP07339 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTSDP07339 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CTSDP07339 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.34■□□□□ 0.37
CTSDP07339 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSDP07339 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CTSDP07339 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.34■□□□□ 0.37
CTSDP07339 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSDP07339 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms