Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APOA4P06727 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
APOA4P06727 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
APOA4P06727 LINC01521-201ENST00000504184 1943 ntBASIC20.97■□□□□ 0.95
APOA4P06727 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOA4P06727 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APOA4P06727 AL049796.1-201ENST00000565336 1766 ntBASIC20.97■□□□□ 0.95
APOA4P06727 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.97■□□□□ 0.95
APOA4P06727 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APOA4P06727 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 AC019069.1-201ENST00000610008 1333 ntBASIC20.96■□□□□ 0.95
APOA4P06727 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
APOA4P06727 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
APOA4P06727 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
APOA4P06727 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APOA4P06727 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
APOA4P06727 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
APOA4P06727 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.95■□□□□ 0.94
APOA4P06727 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.95■□□□□ 0.94
APOA4P06727 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.95■□□□□ 0.94
APOA4P06727 TPRG1LP1-201ENST00000598702 760 ntBASIC20.95■□□□□ 0.94
APOA4P06727 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.95■□□□□ 0.94
APOA4P06727 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.95■□□□□ 0.94
APOA4P06727 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
APOA4P06727 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.95■□□□□ 0.94
APOA4P06727 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOA4P06727 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.95■□□□□ 0.94
APOA4P06727 AC003102.1-202ENST00000563394 1796 ntBASIC20.95■□□□□ 0.94
APOA4P06727 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APOA4P06727 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.94■□□□□ 0.94
APOA4P06727 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.94■□□□□ 0.94
APOA4P06727 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
APOA4P06727 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
APOA4P06727 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.94■□□□□ 0.94
APOA4P06727 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
APOA4P06727 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
APOA4P06727 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.94■□□□□ 0.94
APOA4P06727 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
APOA4P06727 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
APOA4P06727 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APOA4P06727 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APOA4P06727 AC055733.4-201ENST00000638462 1354 ntBASIC20.94■□□□□ 0.94
APOA4P06727 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APOA4P06727 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.93■□□□□ 0.94
APOA4P06727 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.93■□□□□ 0.94
APOA4P06727 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
APOA4P06727 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.93■□□□□ 0.94
APOA4P06727 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.93■□□□□ 0.94
APOA4P06727 LINC02228-203ENST00000641970 1355 ntBASIC20.93■□□□□ 0.94
APOA4P06727 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
APOA4P06727 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
APOA4P06727 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 SLC25A24-204ENST00000569674 2357 ntBASIC20.93■□□□□ 0.94
APOA4P06727 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOA4P06727 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.92■□□□□ 0.94
APOA4P06727 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
APOA4P06727 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
APOA4P06727 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.92■□□□□ 0.94
APOA4P06727 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.92■□□□□ 0.94
APOA4P06727 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 AC123595.1-201ENST00000440769 1046 ntBASIC20.92■□□□□ 0.94
APOA4P06727 YBX1P1-201ENST00000445822 960 ntBASIC20.92■□□□□ 0.94
APOA4P06727 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
APOA4P06727 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.92■□□□□ 0.94
APOA4P06727 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.92■□□□□ 0.94
APOA4P06727 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.92■□□□□ 0.94
APOA4P06727 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
APOA4P06727 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APOA4P06727 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms