Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGN1P05114 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGN1P05114 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGN1P05114 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
HMGN1P05114 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.94■□□□□ 0.62
HMGN1P05114 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HMGN1P05114 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGN1P05114 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGN1P05114 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGN1P05114 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
HMGN1P05114 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGN1P05114 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.93■□□□□ 0.62
HMGN1P05114 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.93■□□□□ 0.62
HMGN1P05114 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGN1P05114 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGN1P05114 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGN1P05114 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HMGN1P05114 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMGN1P05114 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HMGN1P05114 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.92■□□□□ 0.62
HMGN1P05114 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGN1P05114 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGN1P05114 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HMGN1P05114 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
HMGN1P05114 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGN1P05114 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HMGN1P05114 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGN1P05114 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGN1P05114 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HMGN1P05114 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGN1P05114 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGN1P05114 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGN1P05114 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
HMGN1P05114 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGN1P05114 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGN1P05114 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGN1P05114 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGN1P05114 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGN1P05114 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HMGN1P05114 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 SMUG1P1-201ENST00000590640 811 ntBASIC18.9■□□□□ 0.62
HMGN1P05114 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGN1P05114 AP005212.1-201ENST00000581547 1997 ntBASIC18.9■□□□□ 0.62
HMGN1P05114 PLK5-205ENST00000642079 1969 ntBASIC18.9■□□□□ 0.62
HMGN1P05114 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMGN1P05114 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HMGN1P05114 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HMGN1P05114 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMGN1P05114 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
HMGN1P05114 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
HMGN1P05114 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGN1P05114 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.89■□□□□ 0.61
HMGN1P05114 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms