Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV3P03979 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRGV3P03979 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV3P03979 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV3P03979 AP004607.4-201ENST00000530158 1459 ntBASIC16.48■□□□□ 0.23
TRGV3P03979 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRGV3P03979 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.47■□□□□ 0.23
TRGV3P03979 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.47■□□□□ 0.23
TRGV3P03979 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV3P03979 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRGV3P03979 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRGV3P03979 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV3P03979 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 AC007375.3-201ENST00000600936 2314 ntBASIC16.46■□□□□ 0.23
TRGV3P03979 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRGV3P03979 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRGV3P03979 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.46■□□□□ 0.23
TRGV3P03979 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.46■□□□□ 0.23
TRGV3P03979 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 AL162430.1-201ENST00000480705 870 ntBASIC16.46■□□□□ 0.23
TRGV3P03979 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TRGV3P03979 AC008175.2-201ENST00000612840 297 ntBASIC16.46■□□□□ 0.23
TRGV3P03979 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.46■□□□□ 0.23
TRGV3P03979 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV3P03979 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TRGV3P03979 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRGV3P03979 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRGV3P03979 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRGV3P03979 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.45■□□□□ 0.22
TRGV3P03979 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.45■□□□□ 0.22
TRGV3P03979 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRGV3P03979 KRT18P5-201ENST00000436075 1291 ntBASIC16.45■□□□□ 0.22
TRGV3P03979 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.45■□□□□ 0.22
TRGV3P03979 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.45■□□□□ 0.22
TRGV3P03979 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRGV3P03979 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRGV3P03979 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV3P03979 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRGV3P03979 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV3P03979 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV3P03979 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRGV3P03979 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV3P03979 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.44■□□□□ 0.22
TRGV3P03979 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.44■□□□□ 0.22
TRGV3P03979 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
TRGV3P03979 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV3P03979 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 AC138907.5-202ENST00000569484 235 ntBASIC16.44■□□□□ 0.22
TRGV3P03979 AP001160.3-201ENST00000601484 763 ntBASIC16.44■□□□□ 0.22
TRGV3P03979 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 AC120498.10-201ENST00000621827 505 ntBASIC16.44■□□□□ 0.22
TRGV3P03979 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV3P03979 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV3P03979 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.44■□□□□ 0.22
TRGV3P03979 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms