Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6AP02538 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT6AP02538 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6AP02538 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6AP02538 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6AP02538 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6AP02538 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6AP02538 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6AP02538 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.26■□□□□ 0.83
KRT6AP02538 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6AP02538 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.26■□□□□ 0.83
KRT6AP02538 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6AP02538 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6AP02538 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6AP02538 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6AP02538 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6AP02538 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT6AP02538 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT6AP02538 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KRT6AP02538 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRT6AP02538 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
KRT6AP02538 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRT6AP02538 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT6AP02538 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT6AP02538 AC012414.1-201ENST00000556676 535 ntBASIC20.25■□□□□ 0.83
KRT6AP02538 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.25■□□□□ 0.83
KRT6AP02538 AL139246.5-201ENST00000606645 996 ntBASIC20.25■□□□□ 0.83
KRT6AP02538 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT6AP02538 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT6AP02538 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6AP02538 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT6AP02538 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT6AP02538 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
KRT6AP02538 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT6AP02538 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT6AP02538 SUDS3P1-201ENST00000505831 966 ntBASIC20.24■□□□□ 0.83
KRT6AP02538 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.24■□□□□ 0.83
KRT6AP02538 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT6AP02538 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT6AP02538 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6AP02538 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6AP02538 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6AP02538 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT6AP02538 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT6AP02538 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6AP02538 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT6AP02538 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT6AP02538 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KRT6AP02538 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT6AP02538 AL354811.1-201ENST00000610286 706 ntBASIC20.23■□□□□ 0.83
KRT6AP02538 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
KRT6AP02538 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT6AP02538 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT6AP02538 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT6AP02538 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6AP02538 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT6AP02538 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KRT6AP02538 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRT6AP02538 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KRT6AP02538 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms