Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SOD1P00441 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 MIR663A-201ENST00000385250 93 ntBASIC20.76■□□□□ 0.91
SOD1P00441 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SOD1P00441 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.76■□□□□ 0.91
SOD1P00441 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.76■□□□□ 0.91
SOD1P00441 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.76■□□□□ 0.91
SOD1P00441 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.76■□□□□ 0.91
SOD1P00441 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.76■□□□□ 0.91
SOD1P00441 AC013268.1-206ENST00000638368 961 ntBASIC20.76■□□□□ 0.91
SOD1P00441 AC112229.1-201ENST00000639295 961 ntBASIC20.76■□□□□ 0.91
SOD1P00441 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SOD1P00441 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.76■□□□□ 0.91
SOD1P00441 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SOD1P00441 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SOD1P00441 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOD1P00441 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.75■□□□□ 0.91
SOD1P00441 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SOD1P00441 AC007322.1-201ENST00000426983 750 ntBASIC20.75■□□□□ 0.91
SOD1P00441 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.75■□□□□ 0.91
SOD1P00441 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.75■□□□□ 0.91
SOD1P00441 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 AC244015.2-201ENST00000616358 1861 ntBASIC20.75■□□□□ 0.91
SOD1P00441 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOD1P00441 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.75■□□□□ 0.91
SOD1P00441 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SOD1P00441 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.74■□□□□ 0.91
SOD1P00441 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.74■□□□□ 0.91
SOD1P00441 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 AC007322.4-201ENST00000509611 723 ntBASIC20.74■□□□□ 0.91
SOD1P00441 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.74■□□□□ 0.91
SOD1P00441 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SOD1P00441 AC243732.1-201ENST00000612648 864 ntBASIC20.74■□□□□ 0.91
SOD1P00441 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
SOD1P00441 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOD1P00441 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
SOD1P00441 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SOD1P00441 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.73■□□□□ 0.91
SOD1P00441 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.73■□□□□ 0.91
SOD1P00441 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.73■□□□□ 0.91
SOD1P00441 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.73■□□□□ 0.91
SOD1P00441 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.73■□□□□ 0.91
SOD1P00441 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.73■□□□□ 0.91
SOD1P00441 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.73■□□□□ 0.91
SOD1P00441 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
SOD1P00441 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOD1P00441 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 AC068338.2-201ENST00000563278 1430 ntBASIC20.72■□□□□ 0.91
SOD1P00441 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SOD1P00441 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.72■□□□□ 0.91
SOD1P00441 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.72■□□□□ 0.91
SOD1P00441 AC006970.2-201ENST00000450065 779 ntBASIC20.72■□□□□ 0.91
SOD1P00441 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.72■□□□□ 0.91
SOD1P00441 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.72■□□□□ 0.91
SOD1P00441 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 AC005181.1-201ENST00000604782 1256 ntBASIC20.72■□□□□ 0.91
SOD1P00441 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.72■□□□□ 0.91
SOD1P00441 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.72■□□□□ 0.91
SOD1P00441 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
SOD1P00441 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOD1P00441 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD1P00441 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms