Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 AC010980.2-201ENST00000587099 1412 ntBASIC18.71■□□□□ 0.59
CLDN1O95832 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN1O95832 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLDN1O95832 DUSP8P3-201ENST00000399571 1760 ntBASIC18.7■□□□□ 0.58
CLDN1O95832 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN1O95832 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN1O95832 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLDN1O95832 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN1O95832 SNORA78-201ENST00000459373 127 ntBASIC18.7■□□□□ 0.58
CLDN1O95832 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN1O95832 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN1O95832 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.7■□□□□ 0.58
CLDN1O95832 FAM197Y4-202ENST00000622692 608 ntBASIC18.7■□□□□ 0.58
CLDN1O95832 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN1O95832 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CLDN1O95832 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN1O95832 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN1O95832 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN1O95832 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN1O95832 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN1O95832 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN1O95832 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLDN1O95832 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN1O95832 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN1O95832 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN1O95832 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN1O95832 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN1O95832 Z99916.2-201ENST00000604037 246 ntBASIC18.69■□□□□ 0.58
CLDN1O95832 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN1O95832 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN1O95832 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLDN1O95832 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLDN1O95832 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN1O95832 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLDN1O95832 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLDN1O95832 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN1O95832 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN1O95832 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN1O95832 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN1O95832 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN1O95832 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN1O95832 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLDN1O95832 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN1O95832 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN1O95832 RPPH1-201ENST00000516869 333 ntBASIC18.67■□□□□ 0.58
CLDN1O95832 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN1O95832 AC008403.3-201ENST00000598924 454 ntBASIC18.67■□□□□ 0.58
CLDN1O95832 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CLDN1O95832 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 ANOS2P-203ENST00000472227 1816 ntBASIC18.67■□□□□ 0.58
CLDN1O95832 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN1O95832 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN1O95832 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN1O95832 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN1O95832 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms