Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
GGPS1O95749 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.62■■□□□ 1.37
GGPS1O95749 MIPEPP3-201ENST00000412105 444 ntBASIC23.62■■□□□ 1.37
GGPS1O95749 AC073210.2-201ENST00000430369 194 ntBASIC23.62■■□□□ 1.37
GGPS1O95749 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.62■■□□□ 1.37
GGPS1O95749 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
GGPS1O95749 AL591742.1-201ENST00000604433 565 ntBASIC23.62■■□□□ 1.37
GGPS1O95749 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.62■■□□□ 1.37
GGPS1O95749 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
GGPS1O95749 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
GGPS1O95749 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GGPS1O95749 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
GGPS1O95749 AL512625.2-201ENST00000417533 625 ntBASIC23.61■■□□□ 1.37
GGPS1O95749 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
GGPS1O95749 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
GGPS1O95749 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
GGPS1O95749 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.6■■□□□ 1.37
GGPS1O95749 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.6■■□□□ 1.37
GGPS1O95749 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
GGPS1O95749 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
GGPS1O95749 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.6■■□□□ 1.37
GGPS1O95749 MIR4758-201ENST00000577688 71 ntBASIC23.6■■□□□ 1.37
GGPS1O95749 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
GGPS1O95749 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
GGPS1O95749 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.59■■□□□ 1.37
GGPS1O95749 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
GGPS1O95749 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.59■■□□□ 1.37
GGPS1O95749 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.59■■□□□ 1.37
GGPS1O95749 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.59■■□□□ 1.37
GGPS1O95749 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.59■■□□□ 1.37
GGPS1O95749 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GGPS1O95749 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.59■■□□□ 1.37
GGPS1O95749 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.59■■□□□ 1.37
GGPS1O95749 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
GGPS1O95749 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.58■■□□□ 1.37
GGPS1O95749 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.58■■□□□ 1.37
GGPS1O95749 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
GGPS1O95749 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.58■■□□□ 1.37
GGPS1O95749 AL162412.1-201ENST00000567129 965 ntBASIC23.58■■□□□ 1.37
GGPS1O95749 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.58■■□□□ 1.37
GGPS1O95749 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
GGPS1O95749 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
GGPS1O95749 C11orf96-202ENST00000528572 1834 ntBASIC23.58■■□□□ 1.37
GGPS1O95749 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
GGPS1O95749 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
GGPS1O95749 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.58■■□□□ 1.36
GGPS1O95749 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.57■■□□□ 1.36
GGPS1O95749 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.57■■□□□ 1.36
GGPS1O95749 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.57■■□□□ 1.36
GGPS1O95749 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GGPS1O95749 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.57■■□□□ 1.36
GGPS1O95749 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.57■■□□□ 1.36
GGPS1O95749 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
GGPS1O95749 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
GGPS1O95749 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.56■■□□□ 1.36
GGPS1O95749 TSPY20P-201ENST00000450910 630 ntBASIC23.56■■□□□ 1.36
GGPS1O95749 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.56■■□□□ 1.36
GGPS1O95749 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.56■■□□□ 1.36
GGPS1O95749 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GGPS1O95749 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.55■■□□□ 1.36
GGPS1O95749 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.55■■□□□ 1.36
GGPS1O95749 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 GUSBP5-202ENST00000510805 1989 ntBASIC23.55■■□□□ 1.36
GGPS1O95749 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms