Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF1O95521 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF1O95521 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF1O95521 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF1O95521 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PRAMEF1O95521 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF1O95521 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF1O95521 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 AL024507.2-201ENST00000606070 2574 ntBASIC20.88■□□□□ 0.93
PRAMEF1O95521 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF1O95521 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
PRAMEF1O95521 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF1O95521 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
PRAMEF1O95521 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF1O95521 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEF1O95521 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEF1O95521 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.87■□□□□ 0.93
PRAMEF1O95521 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.87■□□□□ 0.93
PRAMEF1O95521 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF1O95521 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEF1O95521 FEM1AP4-201ENST00000443167 1987 ntBASIC20.86■□□□□ 0.93
PRAMEF1O95521 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 AC120498.10-201ENST00000621827 505 ntBASIC20.86■□□□□ 0.93
PRAMEF1O95521 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF1O95521 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEF1O95521 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF1O95521 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF1O95521 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF1O95521 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF1O95521 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF1O95521 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF1O95521 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 AF106564.1-201ENST00000607058 2553 ntBASIC20.84■□□□□ 0.93
PRAMEF1O95521 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 KRT18P20-201ENST00000548986 1279 ntBASIC20.84■□□□□ 0.93
PRAMEF1O95521 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF1O95521 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
PRAMEF1O95521 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF1O95521 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRAMEF1O95521 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.83■□□□□ 0.93
PRAMEF1O95521 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF1O95521 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF1O95521 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.83■□□□□ 0.93
PRAMEF1O95521 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms