Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SCAF4O95104 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAF4O95104 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.07■□□□□ 0.32
SCAF4O95104 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
SCAF4O95104 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCAF4O95104 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCAF4O95104 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAF4O95104 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.06■□□□□ 0.32
SCAF4O95104 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAF4O95104 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SCAF4O95104 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.06■□□□□ 0.32
SCAF4O95104 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SCAF4O95104 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
SCAF4O95104 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCAF4O95104 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SCAF4O95104 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAF4O95104 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.05■□□□□ 0.32
SCAF4O95104 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 AC131281.2-201ENST00000520478 145 ntBASIC17.05■□□□□ 0.32
SCAF4O95104 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.05■□□□□ 0.32
SCAF4O95104 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
SCAF4O95104 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAF4O95104 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
SCAF4O95104 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SCAF4O95104 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SCAF4O95104 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCAF4O95104 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SCAF4O95104 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SCAF4O95104 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAF4O95104 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.04■□□□□ 0.32
SCAF4O95104 AL031602.1-201ENST00000633169 911 ntBASIC17.04■□□□□ 0.32
SCAF4O95104 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAF4O95104 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAF4O95104 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAF4O95104 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.04■□□□□ 0.32
SCAF4O95104 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAF4O95104 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SCAF4O95104 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAF4O95104 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SCAF4O95104 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
SCAF4O95104 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.03■□□□□ 0.32
SCAF4O95104 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SCAF4O95104 FEM1AP1-201ENST00000431297 1995 ntBASIC17.03■□□□□ 0.32
SCAF4O95104 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAF4O95104 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAF4O95104 AL034346.1-201ENST00000568244 1277 ntBASIC17.03■□□□□ 0.32
SCAF4O95104 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms