Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NKX2-2O95096 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-2O95096 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NKX2-2O95096 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-2O95096 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 AC034268.1-201ENST00000441047 882 ntBASIC19.38■□□□□ 0.69
NKX2-2O95096 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NKX2-2O95096 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NKX2-2O95096 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-2O95096 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-2O95096 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-2O95096 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-2O95096 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NKX2-2O95096 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-2O95096 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-2O95096 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-2O95096 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-2O95096 KRT18P61-201ENST00000585825 1298 ntBASIC19.37■□□□□ 0.69
NKX2-2O95096 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-2O95096 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-2O95096 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-2O95096 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.37■□□□□ 0.69
NKX2-2O95096 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.36■□□□□ 0.69
NKX2-2O95096 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX2-2O95096 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 KRT16P2-201ENST00000414673 1423 ntBASIC19.36■□□□□ 0.69
NKX2-2O95096 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NKX2-2O95096 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX2-2O95096 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX2-2O95096 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.36■□□□□ 0.69
NKX2-2O95096 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.36■□□□□ 0.69
NKX2-2O95096 AC087623.3-201ENST00000607047 1098 ntBASIC19.36■□□□□ 0.69
NKX2-2O95096 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX2-2O95096 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX2-2O95096 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NKX2-2O95096 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-2O95096 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX2-2O95096 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NKX2-2O95096 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.35■□□□□ 0.69
NKX2-2O95096 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-2O95096 AC026271.2-201ENST00000428091 497 ntBASIC19.35■□□□□ 0.69
NKX2-2O95096 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-2O95096 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.35■□□□□ 0.69
NKX2-2O95096 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-2O95096 KRT18P20-201ENST00000548986 1279 ntBASIC19.35■□□□□ 0.69
NKX2-2O95096 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-2O95096 AC120498.10-201ENST00000621827 505 ntBASIC19.35■□□□□ 0.69
NKX2-2O95096 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-2O95096 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.35■□□□□ 0.69
NKX2-2O95096 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-2O95096 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-2O95096 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-2O95096 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-2O95096 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.34■□□□□ 0.69
NKX2-2O95096 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 KRT19P1-201ENST00000405746 1186 ntBASIC19.34■□□□□ 0.69
NKX2-2O95096 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.34■□□□□ 0.69
NKX2-2O95096 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-2O95096 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-2O95096 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-2O95096 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-2O95096 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-2O95096 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-2O95096 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-2O95096 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.33■□□□□ 0.69
NKX2-2O95096 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-2O95096 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-2O95096 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.33■□□□□ 0.69
NKX2-2O95096 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NKX2-2O95096 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-2O95096 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms