Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RFPL1O75677 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
RFPL1O75677 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RFPL1O75677 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFPL1O75677 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RFPL1O75677 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
RFPL1O75677 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RFPL1O75677 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.01■□□□□ 0.95
RFPL1O75677 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.01■□□□□ 0.95
RFPL1O75677 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.01■□□□□ 0.95
RFPL1O75677 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.01■□□□□ 0.95
RFPL1O75677 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL1O75677 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RFPL1O75677 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21■□□□□ 0.95
RFPL1O75677 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21■□□□□ 0.95
RFPL1O75677 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21■□□□□ 0.95
RFPL1O75677 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21■□□□□ 0.95
RFPL1O75677 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 PLK5-205ENST00000642079 1969 ntBASIC21■□□□□ 0.95
RFPL1O75677 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21■□□□□ 0.95
RFPL1O75677 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21■□□□□ 0.95
RFPL1O75677 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21■□□□□ 0.95
RFPL1O75677 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFPL1O75677 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21■□□□□ 0.95
RFPL1O75677 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL1O75677 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RFPL1O75677 AC034268.1-201ENST00000441047 882 ntBASIC20.99■□□□□ 0.95
RFPL1O75677 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFPL1O75677 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL1O75677 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL1O75677 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL1O75677 AC006128.1-201ENST00000624704 1661 ntBASIC20.99■□□□□ 0.95
RFPL1O75677 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RFPL1O75677 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.98■□□□□ 0.95
RFPL1O75677 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.98■□□□□ 0.95
RFPL1O75677 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.98■□□□□ 0.95
RFPL1O75677 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.98■□□□□ 0.95
RFPL1O75677 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.98■□□□□ 0.95
RFPL1O75677 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.98■□□□□ 0.95
RFPL1O75677 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.98■□□□□ 0.95
RFPL1O75677 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL1O75677 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.98■□□□□ 0.95
RFPL1O75677 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.97■□□□□ 0.95
RFPL1O75677 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.97■□□□□ 0.95
RFPL1O75677 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.97■□□□□ 0.95
RFPL1O75677 AC126544.1-201ENST00000580842 1059 ntBASIC20.97■□□□□ 0.95
RFPL1O75677 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RFPL1O75677 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL1O75677 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 AP005212.1-201ENST00000581547 1997 ntBASIC20.96■□□□□ 0.95
RFPL1O75677 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RFPL1O75677 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.96■□□□□ 0.95
RFPL1O75677 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.96■□□□□ 0.95
RFPL1O75677 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.96■□□□□ 0.95
RFPL1O75677 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.96■□□□□ 0.95
RFPL1O75677 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.96■□□□□ 0.95
RFPL1O75677 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RFPL1O75677 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
RFPL1O75677 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL1O75677 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RFPL1O75677 GABARAPL3-202ENST00000624044 1851 ntBASIC20.96■□□□□ 0.95
RFPL1O75677 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms