Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.7■□□□□ 0.9
SUPT3HO75486 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SUPT3HO75486 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
SUPT3HO75486 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 AL355001.2-201ENST00000620617 1191 ntBASIC20.7■□□□□ 0.9
SUPT3HO75486 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SUPT3HO75486 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SUPT3HO75486 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SUPT3HO75486 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.69■□□□□ 0.9
SUPT3HO75486 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.69■□□□□ 0.9
SUPT3HO75486 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.69■□□□□ 0.9
SUPT3HO75486 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SUPT3HO75486 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.69■□□□□ 0.9
SUPT3HO75486 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.69■□□□□ 0.9
SUPT3HO75486 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.69■□□□□ 0.9
SUPT3HO75486 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SUPT3HO75486 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUPT3HO75486 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SUPT3HO75486 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
SUPT3HO75486 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.68■□□□□ 0.9
SUPT3HO75486 MIR939-201ENST00000401314 82 ntBASIC20.68■□□□□ 0.9
SUPT3HO75486 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 RASA4CP-201ENST00000424092 1398 ntBASIC20.68■□□□□ 0.9
SUPT3HO75486 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUPT3HO75486 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.68■□□□□ 0.9
SUPT3HO75486 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SUPT3HO75486 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.67■□□□□ 0.9
SUPT3HO75486 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SUPT3HO75486 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.67■□□□□ 0.9
SUPT3HO75486 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.67■□□□□ 0.9
SUPT3HO75486 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.67■□□□□ 0.9
SUPT3HO75486 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.67■□□□□ 0.9
SUPT3HO75486 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SUPT3HO75486 AL049796.1-201ENST00000565336 1766 ntBASIC20.67■□□□□ 0.9
SUPT3HO75486 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUPT3HO75486 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUPT3HO75486 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUPT3HO75486 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SUPT3HO75486 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUPT3HO75486 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUPT3HO75486 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
SUPT3HO75486 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
SUPT3HO75486 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SUPT3HO75486 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.66■□□□□ 0.9
SUPT3HO75486 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
SUPT3HO75486 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.65■□□□□ 0.9
SUPT3HO75486 AC005224.4-201ENST00000583262 1652 ntBASIC20.65■□□□□ 0.9
SUPT3HO75486 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 AC055733.4-201ENST00000638462 1354 ntBASIC20.65■□□□□ 0.9
SUPT3HO75486 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUPT3HO75486 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms