Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUBNO60494 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUBNO60494 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.91■□□□□ 0.3
CUBNO60494 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUBNO60494 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUBNO60494 AC092368.3-202ENST00000574180 1591 ntBASIC16.9■□□□□ 0.3
CUBNO60494 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CUBNO60494 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.9■□□□□ 0.3
CUBNO60494 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.9■□□□□ 0.3
CUBNO60494 AL355075.4-201ENST00000554988 638 ntBASIC16.9■□□□□ 0.3
CUBNO60494 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.9■□□□□ 0.3
CUBNO60494 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CUBNO60494 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CUBNO60494 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
CUBNO60494 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.9■□□□□ 0.3
CUBNO60494 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.89■□□□□ 0.3
CUBNO60494 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.89■□□□□ 0.3
CUBNO60494 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.89■□□□□ 0.29
CUBNO60494 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 AC137767.1-201ENST00000602918 1920 ntBASIC16.89■□□□□ 0.29
CUBNO60494 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CUBNO60494 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.89■□□□□ 0.29
CUBNO60494 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.89■□□□□ 0.29
CUBNO60494 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.89■□□□□ 0.29
CUBNO60494 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CUBNO60494 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.88■□□□□ 0.29
CUBNO60494 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.88■□□□□ 0.29
CUBNO60494 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.88■□□□□ 0.29
CUBNO60494 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.88■□□□□ 0.29
CUBNO60494 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 AC092068.2-201ENST00000590491 1708 ntBASIC16.88■□□□□ 0.29
CUBNO60494 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.88■□□□□ 0.29
CUBNO60494 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.88■□□□□ 0.29
CUBNO60494 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.88■□□□□ 0.29
CUBNO60494 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.88■□□□□ 0.29
CUBNO60494 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.88■□□□□ 0.29
CUBNO60494 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CUBNO60494 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CUBNO60494 AC087499.1-201ENST00000418141 1075 ntBASIC16.88■□□□□ 0.29
CUBNO60494 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.88■□□□□ 0.29
CUBNO60494 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CUBNO60494 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CUBNO60494 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CUBNO60494 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 AL591742.1-201ENST00000604433 565 ntBASIC16.87■□□□□ 0.29
CUBNO60494 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 KRT16P2-201ENST00000414673 1423 ntBASIC16.87■□□□□ 0.29
CUBNO60494 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.87■□□□□ 0.29
CUBNO60494 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 AC053503.5-201ENST00000601508 636 ntBASIC16.87■□□□□ 0.29
CUBNO60494 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.87■□□□□ 0.29
CUBNO60494 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.87■□□□□ 0.29
CUBNO60494 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 SOX15-203ENST00000570788 1093 ntBASIC16.87■□□□□ 0.29
CUBNO60494 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CUBNO60494 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CUBNO60494 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CUBNO60494 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CUBNO60494 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms