Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH7O60245 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH7O60245 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDH7O60245 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH7O60245 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20■□□□□ 0.79
PCDH7O60245 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20■□□□□ 0.79
PCDH7O60245 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDH7O60245 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH7O60245 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH7O60245 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH7O60245 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PCDH7O60245 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PCDH7O60245 EEF1DP3-203ENST00000566025 782 ntBASIC19.99■□□□□ 0.79
PCDH7O60245 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH7O60245 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH7O60245 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDH7O60245 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH7O60245 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH7O60245 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH7O60245 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH7O60245 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDH7O60245 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
PCDH7O60245 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDH7O60245 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH7O60245 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH7O60245 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH7O60245 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH7O60245 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH7O60245 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.97■□□□□ 0.79
PCDH7O60245 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDH7O60245 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH7O60245 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDH7O60245 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH7O60245 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 AC053503.5-201ENST00000601508 636 ntBASIC19.97■□□□□ 0.79
PCDH7O60245 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PCDH7O60245 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH7O60245 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH7O60245 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH7O60245 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 AC027612.3-201ENST00000413684 1047 ntBASIC19.96■□□□□ 0.79
PCDH7O60245 AC079140.4-201ENST00000507448 529 ntBASIC19.96■□□□□ 0.79
PCDH7O60245 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDH7O60245 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH7O60245 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH7O60245 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH7O60245 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDH7O60245 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH7O60245 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms