Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX5O60225 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.9■□□□□ 0.46
SSX5O60225 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SSX5O60225 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 AC239859.2-201ENST00000444165 318 ntBASIC17.9■□□□□ 0.46
SSX5O60225 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SSX5O60225 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX5O60225 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SSX5O60225 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSX5O60225 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSX5O60225 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SSX5O60225 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SSX5O60225 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
SSX5O60225 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSX5O60225 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.89■□□□□ 0.45
SSX5O60225 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.89■□□□□ 0.45
SSX5O60225 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SSX5O60225 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.88■□□□□ 0.45
SSX5O60225 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.88■□□□□ 0.45
SSX5O60225 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.88■□□□□ 0.45
SSX5O60225 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.88■□□□□ 0.45
SSX5O60225 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
SSX5O60225 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.88■□□□□ 0.45
SSX5O60225 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.88■□□□□ 0.45
SSX5O60225 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SSX5O60225 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSX5O60225 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SSX5O60225 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
SSX5O60225 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX5O60225 OR2I1P-207ENST00000453522 948 ntBASIC17.87■□□□□ 0.45
SSX5O60225 AC010141.3-201ENST00000456659 717 ntBASIC17.87■□□□□ 0.45
SSX5O60225 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.87■□□□□ 0.45
SSX5O60225 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SSX5O60225 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX5O60225 AC099791.2-201ENST00000605725 427 ntBASIC17.87■□□□□ 0.45
SSX5O60225 MIR6724-1-201ENST00000616420 92 ntBASIC17.87■□□□□ 0.45
SSX5O60225 MIR6724-2-201ENST00000616483 92 ntBASIC17.87■□□□□ 0.45
SSX5O60225 MIR6724-4-201ENST00000617390 92 ntBASIC17.87■□□□□ 0.45
SSX5O60225 MIR6724-3-201ENST00000622482 92 ntBASIC17.87■□□□□ 0.45
SSX5O60225 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SSX5O60225 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX5O60225 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SSX5O60225 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SSX5O60225 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX5O60225 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SSX5O60225 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX5O60225 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SSX5O60225 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.86■□□□□ 0.45
SSX5O60225 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SSX5O60225 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX5O60225 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.86■□□□□ 0.45
SSX5O60225 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SSX5O60225 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 AC087239.1-201ENST00000622671 572 ntBASIC17.86■□□□□ 0.45
SSX5O60225 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SSX5O60225 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SSX5O60225 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX5O60225 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX5O60225 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX5O60225 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms