Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PEX1O43933 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PEX1O43933 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX1O43933 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX1O43933 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX1O43933 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PEX1O43933 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PEX1O43933 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX1O43933 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PEX1O43933 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX1O43933 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX1O43933 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
PEX1O43933 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.3■□□□□ 0.84
PEX1O43933 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PEX1O43933 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX1O43933 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PEX1O43933 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.3■□□□□ 0.84
PEX1O43933 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX1O43933 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX1O43933 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX1O43933 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PEX1O43933 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PEX1O43933 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PEX1O43933 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
PEX1O43933 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PEX1O43933 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEX1O43933 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEX1O43933 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.28■□□□□ 0.84
PEX1O43933 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PEX1O43933 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PEX1O43933 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEX1O43933 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PEX1O43933 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.28■□□□□ 0.84
PEX1O43933 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
PEX1O43933 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.28■□□□□ 0.84
PEX1O43933 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PEX1O43933 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
PEX1O43933 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
PEX1O43933 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PEX1O43933 TSPY26P-201ENST00000476365 1326 ntBASIC20.27■□□□□ 0.84
PEX1O43933 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.27■□□□□ 0.84
PEX1O43933 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
PEX1O43933 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PEX1O43933 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.27■□□□□ 0.84
PEX1O43933 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PEX1O43933 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PEX1O43933 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.27■□□□□ 0.84
PEX1O43933 MIR5787-201ENST00000611784 55 ntBASIC20.27■□□□□ 0.84
PEX1O43933 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PEX1O43933 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PEX1O43933 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PEX1O43933 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PEX1O43933 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PEX1O43933 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PEX1O43933 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PEX1O43933 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PEX1O43933 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PEX1O43933 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms