Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC087623.3-201ENST00000607047 1098 ntBASIC19.89■□□□□ 0.77
PROM1O43490 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PROM1O43490 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 FEM1AP4-201ENST00000443167 1987 ntBASIC19.88■□□□□ 0.77
PROM1O43490 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.88■□□□□ 0.77
PROM1O43490 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 AP004607.4-201ENST00000530158 1459 ntBASIC19.88■□□□□ 0.77
PROM1O43490 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.88■□□□□ 0.77
PROM1O43490 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PROM1O43490 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.88■□□□□ 0.77
PROM1O43490 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PROM1O43490 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.88■□□□□ 0.77
PROM1O43490 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.88■□□□□ 0.77
PROM1O43490 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.88■□□□□ 0.77
PROM1O43490 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.88■□□□□ 0.77
PROM1O43490 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PROM1O43490 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PROM1O43490 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.87■□□□□ 0.77
PROM1O43490 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 AC034268.1-201ENST00000441047 882 ntBASIC19.87■□□□□ 0.77
PROM1O43490 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.87■□□□□ 0.77
PROM1O43490 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
PROM1O43490 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.87■□□□□ 0.77
PROM1O43490 AC138907.5-202ENST00000569484 235 ntBASIC19.87■□□□□ 0.77
PROM1O43490 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PROM1O43490 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.87■□□□□ 0.77
PROM1O43490 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.87■□□□□ 0.77
PROM1O43490 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PROM1O43490 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.87■□□□□ 0.77
PROM1O43490 AC004854.2-201ENST00000608450 1441 ntBASIC19.86■□□□□ 0.77
PROM1O43490 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.86■□□□□ 0.77
PROM1O43490 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.86■□□□□ 0.77
PROM1O43490 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.86■□□□□ 0.77
PROM1O43490 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.86■□□□□ 0.77
PROM1O43490 AC104187.1-201ENST00000607510 612 ntBASIC19.86■□□□□ 0.77
PROM1O43490 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PROM1O43490 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PROM1O43490 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PROM1O43490 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.85■□□□□ 0.77
PROM1O43490 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
PROM1O43490 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PROM1O43490 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.85■□□□□ 0.77
PROM1O43490 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PROM1O43490 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PROM1O43490 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.84■□□□□ 0.77
PROM1O43490 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.84■□□□□ 0.77
PROM1O43490 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.84■□□□□ 0.77
PROM1O43490 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.84■□□□□ 0.77
PROM1O43490 AL162430.1-201ENST00000480705 870 ntBASIC19.84■□□□□ 0.77
PROM1O43490 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.84■□□□□ 0.77
PROM1O43490 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.84■□□□□ 0.77
PROM1O43490 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.84■□□□□ 0.77
PROM1O43490 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PROM1O43490 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
PROM1O43490 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PROM1O43490 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PROM1O43490 AC061975.6-201ENST00000579045 1553 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms