Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 AC027612.3-201ENST00000413684 1047 ntBASIC20.96■□□□□ 0.95
PFDN6O15212 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN6O15212 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN6O15212 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PFDN6O15212 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.96■□□□□ 0.95
PFDN6O15212 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.96■□□□□ 0.95
PFDN6O15212 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.96■□□□□ 0.95
PFDN6O15212 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.96■□□□□ 0.95
PFDN6O15212 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
PFDN6O15212 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PFDN6O15212 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.95■□□□□ 0.94
PFDN6O15212 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.95■□□□□ 0.94
PFDN6O15212 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.95■□□□□ 0.94
PFDN6O15212 MIR6084-201ENST00000622012 110 ntBASIC20.95■□□□□ 0.94
PFDN6O15212 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PFDN6O15212 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
PFDN6O15212 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
PFDN6O15212 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 FEM1AP4-201ENST00000443167 1987 ntBASIC20.94■□□□□ 0.94
PFDN6O15212 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.94■□□□□ 0.94
PFDN6O15212 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 AC079140.4-201ENST00000507448 529 ntBASIC20.94■□□□□ 0.94
PFDN6O15212 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PFDN6O15212 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PFDN6O15212 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.93■□□□□ 0.94
PFDN6O15212 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN6O15212 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN6O15212 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN6O15212 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.93■□□□□ 0.94
PFDN6O15212 AC053503.5-201ENST00000601508 636 ntBASIC20.93■□□□□ 0.94
PFDN6O15212 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.93■□□□□ 0.94
PFDN6O15212 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN6O15212 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 LINC02228-203ENST00000641970 1355 ntBASIC20.93■□□□□ 0.94
PFDN6O15212 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PFDN6O15212 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.93■□□□□ 0.94
PFDN6O15212 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PFDN6O15212 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.93■□□□□ 0.94
PFDN6O15212 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PFDN6O15212 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PFDN6O15212 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PFDN6O15212 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PFDN6O15212 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.92■□□□□ 0.94
PFDN6O15212 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PFDN6O15212 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PFDN6O15212 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PFDN6O15212 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PFDN6O15212 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN6O15212 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PFDN6O15212 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PFDN6O15212 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PFDN6O15212 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PFDN6O15212 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN6O15212 KRT87P-202ENST00000534226 1464 ntBASIC20.9■□□□□ 0.94
PFDN6O15212 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN6O15212 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN6O15212 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PFDN6O15212 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN6O15212 EEF1DP3-203ENST00000566025 782 ntBASIC20.9■□□□□ 0.94
PFDN6O15212 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
PFDN6O15212 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms