Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP3D1O14617 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3D1O14617 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.53■□□□□ 0.72
AP3D1O14617 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP3D1O14617 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3D1O14617 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.52■□□□□ 0.72
AP3D1O14617 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 AC003102.1-202ENST00000563394 1796 ntBASIC19.52■□□□□ 0.72
AP3D1O14617 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3D1O14617 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.52■□□□□ 0.72
AP3D1O14617 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.52■□□□□ 0.72
AP3D1O14617 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.52■□□□□ 0.72
AP3D1O14617 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3D1O14617 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.52■□□□□ 0.72
AP3D1O14617 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3D1O14617 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3D1O14617 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 AC105233.4-201ENST00000642045 216 ntBASIC19.52■□□□□ 0.72
AP3D1O14617 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
AP3D1O14617 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3D1O14617 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3D1O14617 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
AP3D1O14617 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.52■□□□□ 0.71
AP3D1O14617 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
AP3D1O14617 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.71
AP3D1O14617 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.52■□□□□ 0.71
AP3D1O14617 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.51■□□□□ 0.71
AP3D1O14617 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.51■□□□□ 0.71
AP3D1O14617 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
AP3D1O14617 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.51■□□□□ 0.71
AP3D1O14617 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.51■□□□□ 0.71
AP3D1O14617 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.51■□□□□ 0.71
AP3D1O14617 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3D1O14617 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
AP3D1O14617 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.5■□□□□ 0.71
AP3D1O14617 AC142381.2-201ENST00000566120 298 ntBASIC19.5■□□□□ 0.71
AP3D1O14617 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
AP3D1O14617 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
AP3D1O14617 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 AP006587.3-201ENST00000525742 1516 ntBASIC19.5■□□□□ 0.71
AP3D1O14617 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3D1O14617 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
AP3D1O14617 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
AP3D1O14617 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3D1O14617 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
AP3D1O14617 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
AP3D1O14617 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.49■□□□□ 0.71
AP3D1O14617 MIR572-201ENST00000384983 95 ntBASIC19.49■□□□□ 0.71
AP3D1O14617 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.49■□□□□ 0.71
AP3D1O14617 AC005837.3-201ENST00000612163 286 ntBASIC19.49■□□□□ 0.71
AP3D1O14617 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
AP3D1O14617 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
AP3D1O14617 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3D1O14617 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3D1O14617 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3D1O14617 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.48■□□□□ 0.71
AP3D1O14617 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms