Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.81■□□□□ 0.28
UPK2O00526 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UPK2O00526 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.81■□□□□ 0.28
UPK2O00526 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 MIR572-201ENST00000384983 95 ntBASIC16.81■□□□□ 0.28
UPK2O00526 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.81■□□□□ 0.28
UPK2O00526 AP001330.3-201ENST00000520123 633 ntBASIC16.81■□□□□ 0.28
UPK2O00526 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UPK2O00526 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UPK2O00526 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK2O00526 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.81■□□□□ 0.28
UPK2O00526 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UPK2O00526 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 AL157384.1-201ENST00000445995 2473 ntBASIC16.8■□□□□ 0.28
UPK2O00526 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 LINC01521-201ENST00000504184 1943 ntBASIC16.8■□□□□ 0.28
UPK2O00526 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.8■□□□□ 0.28
UPK2O00526 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UPK2O00526 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK2O00526 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 AL355001.2-201ENST00000620617 1191 ntBASIC16.8■□□□□ 0.28
UPK2O00526 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UPK2O00526 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK2O00526 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPK2O00526 RASA4CP-201ENST00000424092 1398 ntBASIC16.79■□□□□ 0.28
UPK2O00526 AC006128.1-201ENST00000624704 1661 ntBASIC16.79■□□□□ 0.28
UPK2O00526 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
UPK2O00526 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.79■□□□□ 0.28
UPK2O00526 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.79■□□□□ 0.28
UPK2O00526 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK2O00526 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.79■□□□□ 0.28
UPK2O00526 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UPK2O00526 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UPK2O00526 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UPK2O00526 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UPK2O00526 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.78■□□□□ 0.28
UPK2O00526 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.78■□□□□ 0.28
UPK2O00526 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.78■□□□□ 0.28
UPK2O00526 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.78■□□□□ 0.28
UPK2O00526 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.78■□□□□ 0.28
UPK2O00526 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UPK2O00526 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UPK2O00526 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK2O00526 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UPK2O00526 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK2O00526 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK2O00526 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK2O00526 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
UPK2O00526 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UPK2O00526 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPK2O00526 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK2O00526 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.77■□□□□ 0.28
UPK2O00526 MIR939-201ENST00000401314 82 ntBASIC16.77■□□□□ 0.28
UPK2O00526 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms