Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 IRS3P-201ENST00000223076 1006 ntBASIC19.87■□□□□ 0.77
UPK1AO00322 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 AL358852.1-201ENST00000623174 1268 ntBASIC19.87■□□□□ 0.77
UPK1AO00322 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
UPK1AO00322 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.87■□□□□ 0.77
UPK1AO00322 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
UPK1AO00322 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1AO00322 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
UPK1AO00322 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.86■□□□□ 0.77
UPK1AO00322 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UPK1AO00322 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
UPK1AO00322 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1AO00322 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
UPK1AO00322 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UPK1AO00322 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UPK1AO00322 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.85■□□□□ 0.77
UPK1AO00322 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.85■□□□□ 0.77
UPK1AO00322 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1AO00322 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UPK1AO00322 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
UPK1AO00322 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK1AO00322 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.84■□□□□ 0.77
UPK1AO00322 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.84■□□□□ 0.77
UPK1AO00322 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK1AO00322 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK1AO00322 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1AO00322 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK1AO00322 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.83■□□□□ 0.77
UPK1AO00322 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1AO00322 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.83■□□□□ 0.77
UPK1AO00322 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1AO00322 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1AO00322 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
UPK1AO00322 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1AO00322 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPK1AO00322 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1AO00322 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.83■□□□□ 0.77
UPK1AO00322 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPK1AO00322 MIR6084-201ENST00000622012 110 ntBASIC19.83■□□□□ 0.77
UPK1AO00322 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1AO00322 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1AO00322 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
UPK1AO00322 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1AO00322 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1AO00322 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
UPK1AO00322 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
UPK1AO00322 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.82■□□□□ 0.76
UPK1AO00322 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UPK1AO00322 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.82■□□□□ 0.76
UPK1AO00322 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms