Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC188H7C350 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC188H7C350 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC188H7C350 AC027702.1-201ENST00000563810 1770 ntBASIC21.79■■□□□ 1.08
CCDC188H7C350 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC188H7C350 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC188H7C350 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC188H7C350 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC188H7C350 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CCDC188H7C350 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC188H7C350 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC188H7C350 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC188H7C350 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.78■■□□□ 1.08
CCDC188H7C350 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC188H7C350 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC188H7C350 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC188H7C350 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC188H7C350 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC188H7C350 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC188H7C350 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC188H7C350 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC188H7C350 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC188H7C350 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC188H7C350 AC020907.5-201ENST00000624372 1936 ntBASIC21.76■■□□□ 1.07
CCDC188H7C350 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC188H7C350 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC188H7C350 AC007225.1-201ENST00000566331 1836 ntBASIC21.76■■□□□ 1.07
CCDC188H7C350 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC188H7C350 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC188H7C350 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC188H7C350 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC188H7C350 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC188H7C350 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC188H7C350 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC188H7C350 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC188H7C350 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC188H7C350 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
CCDC188H7C350 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CCDC188H7C350 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC188H7C350 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC188H7C350 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 AC136469.2-201ENST00000623944 1028 ntBASIC21.75■■□□□ 1.07
CCDC188H7C350 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC188H7C350 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC188H7C350 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC188H7C350 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC188H7C350 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC188H7C350 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC188H7C350 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC188H7C350 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC188H7C350 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC188H7C350 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 SLC47A1P1-202ENST00000449666 945 ntBASIC21.74■■□□□ 1.07
CCDC188H7C350 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.74■■□□□ 1.07
CCDC188H7C350 DUX4L19-201ENST00000557448 1267 ntBASIC21.74■■□□□ 1.07
CCDC188H7C350 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 AL512631.2-201ENST00000604634 923 ntBASIC21.74■■□□□ 1.07
CCDC188H7C350 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC188H7C350 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC188H7C350 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC188H7C350 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC188H7C350 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC188H7C350 SERBP1P1-201ENST00000396021 1160 ntBASIC21.73■■□□□ 1.07
CCDC188H7C350 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC188H7C350 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC188H7C350 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC188H7C350 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC188H7C350 SYT6-210ENST00000641643 1587 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms