Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 DUX4L6-201ENST00000626483 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 DUX4L1-201ENST00000627662 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 DUX4L8-201ENST00000629013 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 DUX4L3-201ENST00000630187 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 DUX4L7-201ENST00000630678 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 DUX4L5-201ENST00000630834 1275 ntBASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM90A9PA6NNJ1 AL049796.1-201ENST00000565336 1766 ntBASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM90A9PA6NNJ1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM90A9PA6NNJ1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 MIR5787-201ENST00000611784 55 ntBASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM90A9PA6NNJ1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 AC079140.4-201ENST00000507448 529 ntBASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 AC003102.1-202ENST00000563394 1796 ntBASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM90A9PA6NNJ1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms