Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 KRT18P20-201ENST00000548986 1279 ntBASIC16.58■□□□□ 0.24
LINC01548A6NM66 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 MFSD11-216ENST00000590393 1141 ntBASIC16.58■□□□□ 0.24
LINC01548A6NM66 BID-214ENST00000617586 542 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 MYCNOS-205ENST00000641950 531 ntBASIC16.58■□□□□ 0.24
LINC01548A6NM66 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC01548A6NM66 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC01548A6NM66 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 POU5F1P4-201ENST00000413175 1085 ntBASIC16.57■□□□□ 0.24
LINC01548A6NM66 KRT18P11-201ENST00000435214 1283 ntBASIC16.57■□□□□ 0.24
LINC01548A6NM66 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC01548A6NM66 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC01548A6NM66 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01548A6NM66 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 Z98882.1-201ENST00000622160 2253 ntBASIC16.56■□□□□ 0.24
LINC01548A6NM66 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01548A6NM66 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01548A6NM66 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01548A6NM66 RARRES2P11-201ENST00000635158 484 ntBASIC16.56■□□□□ 0.24
LINC01548A6NM66 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC01548A6NM66 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINC01548A6NM66 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.55■□□□□ 0.24
LINC01548A6NM66 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC01548A6NM66 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 CDCA4P2-201ENST00000441182 718 ntBASIC16.55■□□□□ 0.24
LINC01548A6NM66 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LINC01548A6NM66 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.55■□□□□ 0.24
LINC01548A6NM66 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.55■□□□□ 0.24
LINC01548A6NM66 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC01548A6NM66 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC01548A6NM66 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LINC01548A6NM66 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01548A6NM66 DUX4L16-201ENST00000555130 1264 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms