Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 AC027612.3-201ENST00000413684 1047 ntBASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDHR4A6H8M9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDHR4A6H8M9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDHR4A6H8M9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 AC079140.4-201ENST00000507448 529 ntBASIC19.22■□□□□ 0.67
CDHR4A6H8M9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.22■□□□□ 0.67
CDHR4A6H8M9 KRT87P-202ENST00000534226 1464 ntBASIC19.22■□□□□ 0.67
CDHR4A6H8M9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDHR4A6H8M9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms