Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 Z98882.1-201ENST00000622160 2253 ntBASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 AC007375.3-201ENST00000600936 2314 ntBASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 IRS3P-201ENST00000223076 1006 ntBASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 MIR638-201ENST00000385237 100 ntBASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 AC005224.4-201ENST00000583262 1652 ntBASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV4A0A0C4DH28 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.02■□□□□ -0
TRGV4A0A0C4DH28 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.02□□□□□ -0.01
TRGV4A0A0C4DH28 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRGV4A0A0C4DH28 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRGV4A0A0C4DH28 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRGV4A0A0C4DH28 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms