Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 EDA-201ENST00000338901 1233 ntBASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-3A0A0B4J271 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AP001330.3-201ENST00000520123 633 ntBASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AC110285.6-201ENST00000617652 491 ntBASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AL355001.2-201ENST00000620617 1191 ntBASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-3A0A0B4J271 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AC009237.3-201ENST00000393279 1427 ntBASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AF213884.3-201ENST00000563833 479 ntBASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-3A0A0B4J271 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-3A0A0B4J271 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 RASA4CP-201ENST00000424092 1398 ntBASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAV12-3A0A0B4J271 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms