Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 AC005224.4-201ENST00000583262 1652 ntBASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 AC142381.2-201ENST00000566120 298 ntBASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV39A0A0B4J263 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 MIR6084-201ENST00000622012 110 ntBASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV39A0A0B4J263 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 AL049796.1-201ENST00000565336 1766 ntBASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV39A0A0B4J263 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 AC005837.3-201ENST00000612163 286 ntBASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV39A0A0B4J263 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV39A0A0B4J263 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV39A0A0B4J263 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms