Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 AC105233.4-201ENST00000642045 216 ntBASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 FEM1AP1-201ENST00000431297 1995 ntBASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 PLK5-205ENST00000642079 1969 ntBASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 AC008406.3-201ENST00000620001 1374 ntBASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 AC092667.1-201ENST00000434301 2586 ntBASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 AC009237.3-201ENST00000393279 1427 ntBASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV3A0A0B4J244 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV3A0A0B4J244 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 AC005224.4-201ENST00000583262 1652 ntBASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV3A0A0B4J244 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV3A0A0B4J244 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV3A0A0B4J244 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV3A0A0B4J244 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV3A0A0B4J244 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms