Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 AC104187.1-201ENST00000607510 612 ntBASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 AC137761.2-201ENST00000561729 223 ntBASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 AC145350.3-201ENST00000569033 163 ntBASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.08■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF12-TNFSF13A0A0A6YY99 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 KRT19P1-201ENST00000405746 1186 ntBASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC010141.2-201ENST00000452426 721 ntBASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC008175.2-201ENST00000612840 297 ntBASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC016769.1-201ENST00000409132 1010 ntBASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 POU5F1P4-201ENST00000413175 1085 ntBASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AP001160.3-201ENST00000601484 763 ntBASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms