Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RCL1Q9Y2P8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.76■■□□□ 1.07
RCL1Q9Y2P8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RCL1Q9Y2P8 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.75■■□□□ 1.07
RCL1Q9Y2P8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCL1Q9Y2P8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCL1Q9Y2P8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RCL1Q9Y2P8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.73■■□□□ 1.07
RCL1Q9Y2P8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCL1Q9Y2P8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.72■■□□□ 1.07
RCL1Q9Y2P8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RCL1Q9Y2P8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RCL1Q9Y2P8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RCL1Q9Y2P8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RCL1Q9Y2P8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RCL1Q9Y2P8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RCL1Q9Y2P8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RCL1Q9Y2P8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
RCL1Q9Y2P8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RCL1Q9Y2P8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.69■■□□□ 1.06
RCL1Q9Y2P8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RCL1Q9Y2P8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.68■■□□□ 1.06
RCL1Q9Y2P8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RCL1Q9Y2P8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
RCL1Q9Y2P8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RCL1Q9Y2P8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RCL1Q9Y2P8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCL1Q9Y2P8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.66■■□□□ 1.06
RCL1Q9Y2P8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCL1Q9Y2P8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RCL1Q9Y2P8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RCL1Q9Y2P8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RCL1Q9Y2P8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RCL1Q9Y2P8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RCL1Q9Y2P8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.64■■□□□ 1.05
RCL1Q9Y2P8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RCL1Q9Y2P8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RCL1Q9Y2P8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCL1Q9Y2P8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCL1Q9Y2P8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.63■■□□□ 1.05
RCL1Q9Y2P8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RCL1Q9Y2P8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RCL1Q9Y2P8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCL1Q9Y2P8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCL1Q9Y2P8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCL1Q9Y2P8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCL1Q9Y2P8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCL1Q9Y2P8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCL1Q9Y2P8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RCL1Q9Y2P8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RCL1Q9Y2P8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCL1Q9Y2P8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCL1Q9Y2P8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.59■■□□□ 1.05
RCL1Q9Y2P8 AL135925.1-201ENST00000605920 1701 ntBASIC21.58■■□□□ 1.05
RCL1Q9Y2P8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCL1Q9Y2P8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCL1Q9Y2P8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RCL1Q9Y2P8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCL1Q9Y2P8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCL1Q9Y2P8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCL1Q9Y2P8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RCL1Q9Y2P8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCL1Q9Y2P8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RCL1Q9Y2P8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCL1Q9Y2P8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCL1Q9Y2P8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RCL1Q9Y2P8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.52■■□□□ 1.04
RCL1Q9Y2P8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCL1Q9Y2P8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RCL1Q9Y2P8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCL1Q9Y2P8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RCL1Q9Y2P8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.49■■□□□ 1.03
RCL1Q9Y2P8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCL1Q9Y2P8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RCL1Q9Y2P8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RCL1Q9Y2P8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
RCL1Q9Y2P8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RCL1Q9Y2P8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
RCL1Q9Y2P8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCL1Q9Y2P8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCL1Q9Y2P8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RCL1Q9Y2P8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RCL1Q9Y2P8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RCL1Q9Y2P8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RCL1Q9Y2P8 DRD5P2-201ENST00000421395 2012 ntBASIC21.43■■□□□ 1.02
RCL1Q9Y2P8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RCL1Q9Y2P8 AL121749.1-202ENST00000609313 2153 ntBASIC21.42■■□□□ 1.02
RCL1Q9Y2P8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RCL1Q9Y2P8 AL139393.2-201ENST00000608721 2025 ntBASIC21.41■■□□□ 1.02
RCL1Q9Y2P8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCL1Q9Y2P8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCL1Q9Y2P8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RCL1Q9Y2P8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RCL1Q9Y2P8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms