Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COMMD9Q9P000 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COMMD9Q9P000 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
COMMD9Q9P000 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.45■■□□□ 1.18
COMMD9Q9P000 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
COMMD9Q9P000 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.44■■□□□ 1.18
COMMD9Q9P000 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.43■■□□□ 1.18
COMMD9Q9P000 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD9Q9P000 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.43■■□□□ 1.18
COMMD9Q9P000 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD9Q9P000 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD9Q9P000 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.42■■□□□ 1.18
COMMD9Q9P000 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD9Q9P000 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD9Q9P000 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD9Q9P000 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD9Q9P000 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
COMMD9Q9P000 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
COMMD9Q9P000 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD9Q9P000 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD9Q9P000 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COMMD9Q9P000 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.39■■□□□ 1.17
COMMD9Q9P000 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.39■■□□□ 1.17
COMMD9Q9P000 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD9Q9P000 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD9Q9P000 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD9Q9P000 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD9Q9P000 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
COMMD9Q9P000 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.37■■□□□ 1.17
COMMD9Q9P000 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.37■■□□□ 1.17
COMMD9Q9P000 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
COMMD9Q9P000 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 AC142086.6-201ENST00000621154 1765 ntBASIC22.36■■□□□ 1.17
COMMD9Q9P000 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD9Q9P000 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
COMMD9Q9P000 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COMMD9Q9P000 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COMMD9Q9P000 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD9Q9P000 ZNRF2P1-201ENST00000441407 443 ntBASIC22.34■■□□□ 1.17
COMMD9Q9P000 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD9Q9P000 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD9Q9P000 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
COMMD9Q9P000 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COMMD9Q9P000 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COMMD9Q9P000 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COMMD9Q9P000 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD9Q9P000 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.32■■□□□ 1.16
COMMD9Q9P000 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD9Q9P000 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.32■■□□□ 1.16
COMMD9Q9P000 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD9Q9P000 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD9Q9P000 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD9Q9P000 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD9Q9P000 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD9Q9P000 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COMMD9Q9P000 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD9Q9P000 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.28■■□□□ 1.16
COMMD9Q9P000 ST7-AS1-201ENST00000456775 1889 ntBASIC22.28■■□□□ 1.16
COMMD9Q9P000 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD9Q9P000 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD9Q9P000 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD9Q9P000 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.27■■□□□ 1.16
COMMD9Q9P000 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD9Q9P000 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD9Q9P000 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD9Q9P000 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.26■■□□□ 1.15
COMMD9Q9P000 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COMMD9Q9P000 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COMMD9Q9P000 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.24■■□□□ 1.15
COMMD9Q9P000 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD9Q9P000 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD9Q9P000 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD9Q9P000 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD9Q9P000 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD9Q9P000 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.22■■□□□ 1.15
COMMD9Q9P000 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD9Q9P000 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
COMMD9Q9P000 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.2■■□□□ 1.15
COMMD9Q9P000 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
COMMD9Q9P000 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.2■■□□□ 1.14
COMMD9Q9P000 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COMMD9Q9P000 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.19■■□□□ 1.14
COMMD9Q9P000 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COMMD9Q9P000 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.19■■□□□ 1.14
COMMD9Q9P000 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
COMMD9Q9P000 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.18■■□□□ 1.14
COMMD9Q9P000 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COMMD9Q9P000 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COMMD9Q9P000 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COMMD9Q9P000 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COMMD9Q9P000 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COMMD9Q9P000 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.16■■□□□ 1.14
COMMD9Q9P000 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COMMD9Q9P000 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.16■■□□□ 1.14
COMMD9Q9P000 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COMMD9Q9P000 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms