Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC40.99■■■■■ 4.15
PTPN23Q9H3S7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC40.99■■■■■ 4.15
PTPN23Q9H3S7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
PTPN23Q9H3S7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.98■■■■■ 4.15
PTPN23Q9H3S7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC40.96■■■■■ 4.15
PTPN23Q9H3S7 ABHD17AP4-201ENST00000411545 909 ntBASIC40.95■■■■■ 4.15
PTPN23Q9H3S7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC40.94■■■■■ 4.14
PTPN23Q9H3S7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
PTPN23Q9H3S7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC40.93■■■■■ 4.14
PTPN23Q9H3S7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC40.93■■■■■ 4.14
PTPN23Q9H3S7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC40.93■■■■■ 4.14
PTPN23Q9H3S7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
PTPN23Q9H3S7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
PTPN23Q9H3S7 MIR7108-201ENST00000614319 87 ntBASIC40.88■■■■■ 4.13
PTPN23Q9H3S7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC40.88■■■■■ 4.13
PTPN23Q9H3S7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC40.87■■■■■ 4.13
PTPN23Q9H3S7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
PTPN23Q9H3S7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
PTPN23Q9H3S7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
PTPN23Q9H3S7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
PTPN23Q9H3S7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
PTPN23Q9H3S7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC40.85■■■■■ 4.13
PTPN23Q9H3S7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.84■■■■■ 4.13
PTPN23Q9H3S7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC40.83■■■■■ 4.13
PTPN23Q9H3S7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC40.82■■■■■ 4.13
PTPN23Q9H3S7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
PTPN23Q9H3S7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.81■■■■■ 4.12
PTPN23Q9H3S7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC40.8■■■■■ 4.12
PTPN23Q9H3S7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
PTPN23Q9H3S7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
PTPN23Q9H3S7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC40.75■■■■■ 4.11
PTPN23Q9H3S7 MIR6090-201ENST00000622481 60 ntBASIC40.75■■■■■ 4.11
PTPN23Q9H3S7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC40.75■■■■■ 4.11
PTPN23Q9H3S7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
PTPN23Q9H3S7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
PTPN23Q9H3S7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC40.71■■■■■ 4.11
PTPN23Q9H3S7 AC108673.1-201ENST00000510422 1159 ntBASIC40.71■■■■■ 4.11
PTPN23Q9H3S7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC40.71■■■■■ 4.11
PTPN23Q9H3S7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.7■■■■■ 4.11
PTPN23Q9H3S7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
PTPN23Q9H3S7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
PTPN23Q9H3S7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
PTPN23Q9H3S7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
PTPN23Q9H3S7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
PTPN23Q9H3S7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC40.66■■■■■ 4.1
PTPN23Q9H3S7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC40.66■■■■■ 4.1
PTPN23Q9H3S7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.65■■■■■ 4.1
PTPN23Q9H3S7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC40.65■■■■■ 4.1
PTPN23Q9H3S7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC40.65■■■■■ 4.1
PTPN23Q9H3S7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC40.65■■■■■ 4.1
PTPN23Q9H3S7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC40.65■■■■■ 4.1
PTPN23Q9H3S7 ZNRF2P2-203ENST00000454624 420 ntBASIC40.64■■■■■ 4.1
PTPN23Q9H3S7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC40.64■■■■■ 4.1
PTPN23Q9H3S7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
PTPN23Q9H3S7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
PTPN23Q9H3S7 DUX4L29-201ENST00000425409 679 ntBASIC40.63■■■■■ 4.09
PTPN23Q9H3S7 AC021231.2-201ENST00000594613 730 ntBASIC40.63■■■■■ 4.09
PTPN23Q9H3S7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC40.63■■■■■ 4.09
PTPN23Q9H3S7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC40.62■■■■■ 4.09
PTPN23Q9H3S7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.61■■■■■ 4.09
PTPN23Q9H3S7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
PTPN23Q9H3S7 AL161658.1-201ENST00000623641 1967 ntBASIC40.61■■■■■ 4.09
PTPN23Q9H3S7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
PTPN23Q9H3S7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
PTPN23Q9H3S7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
PTPN23Q9H3S7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
PTPN23Q9H3S7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
PTPN23Q9H3S7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC40.57■■■■■ 4.09
PTPN23Q9H3S7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.57■■■■■ 4.09
PTPN23Q9H3S7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC40.57■■■■■ 4.08
PTPN23Q9H3S7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
PTPN23Q9H3S7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
PTPN23Q9H3S7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC40.55■■■■■ 4.08
PTPN23Q9H3S7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
PTPN23Q9H3S7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC40.55■■■■■ 4.08
PTPN23Q9H3S7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
PTPN23Q9H3S7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.53■■■■■ 4.08
PTPN23Q9H3S7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
PTPN23Q9H3S7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
PTPN23Q9H3S7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC40.51■■■■■ 4.08
PTPN23Q9H3S7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC40.51■■■■■ 4.08
PTPN23Q9H3S7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
PTPN23Q9H3S7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
PTPN23Q9H3S7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC40.49■■■■■ 4.07
PTPN23Q9H3S7 HLA-V-202ENST00000446817 847 ntBASIC40.49■■■■■ 4.07
PTPN23Q9H3S7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC40.48■■■■■ 4.07
PTPN23Q9H3S7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
PTPN23Q9H3S7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC40.46■■■■■ 4.07
PTPN23Q9H3S7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC40.45■■■■■ 4.07
PTPN23Q9H3S7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
PTPN23Q9H3S7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
PTPN23Q9H3S7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC40.44■■■■■ 4.06
PTPN23Q9H3S7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
PTPN23Q9H3S7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC40.44■■■■■ 4.06
PTPN23Q9H3S7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
PTPN23Q9H3S7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC40.41■■■■■ 4.06
PTPN23Q9H3S7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
PTPN23Q9H3S7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
PTPN23Q9H3S7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
PTPN23Q9H3S7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC40.39■■■■■ 4.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms