Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LCE3DQ9BYE3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LCE3DQ9BYE3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC7.16□□□□□ -1.26
LCE3DQ9BYE3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
LCE3DQ9BYE3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LCE3DQ9BYE3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LCE3DQ9BYE3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LCE3DQ9BYE3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LCE3DQ9BYE3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
LCE3DQ9BYE3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LCE3DQ9BYE3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LCE3DQ9BYE3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC7.15□□□□□ -1.27
LCE3DQ9BYE3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
LCE3DQ9BYE3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LCE3DQ9BYE3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LCE3DQ9BYE3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 AC142086.6-201ENST00000621154 1765 ntBASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC7.12□□□□□ -1.27
LCE3DQ9BYE3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 ST7-AS1-201ENST00000456775 1889 ntBASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LCE3DQ9BYE3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LCE3DQ9BYE3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC7.09□□□□□ -1.27
LCE3DQ9BYE3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
LCE3DQ9BYE3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LCE3DQ9BYE3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LCE3DQ9BYE3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LCE3DQ9BYE3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LCE3DQ9BYE3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LCE3DQ9BYE3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms