Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK5RAP2Q96SN8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK5RAP2Q96SN8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CDK5RAP2Q96SN8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
CDK5RAP2Q96SN8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.01■■■□□ 2.71
CDK5RAP2Q96SN8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDK5RAP2Q96SN8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
CDK5RAP2Q96SN8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CDK5RAP2Q96SN8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK5RAP2Q96SN8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
CDK5RAP2Q96SN8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
CDK5RAP2Q96SN8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.98■■■□□ 2.71
CDK5RAP2Q96SN8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.97■■■□□ 2.71
CDK5RAP2Q96SN8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.97■■■□□ 2.71
CDK5RAP2Q96SN8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.97■■■□□ 2.71
CDK5RAP2Q96SN8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.95■■■□□ 2.71
CDK5RAP2Q96SN8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CDK5RAP2Q96SN8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDK5RAP2Q96SN8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDK5RAP2Q96SN8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CDK5RAP2Q96SN8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CDK5RAP2Q96SN8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDK5RAP2Q96SN8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.91■■■□□ 2.7
CDK5RAP2Q96SN8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDK5RAP2Q96SN8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.9■■■□□ 2.7
CDK5RAP2Q96SN8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDK5RAP2Q96SN8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDK5RAP2Q96SN8 ABHD17AP4-201ENST00000411545 909 ntBASIC31.89■■■□□ 2.69
CDK5RAP2Q96SN8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
CDK5RAP2Q96SN8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDK5RAP2Q96SN8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK5RAP2Q96SN8 MIR7108-201ENST00000614319 87 ntBASIC31.87■■■□□ 2.69
CDK5RAP2Q96SN8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDK5RAP2Q96SN8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK5RAP2Q96SN8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.84■■■□□ 2.69
CDK5RAP2Q96SN8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.84■■■□□ 2.69
CDK5RAP2Q96SN8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.83■■■□□ 2.69
CDK5RAP2Q96SN8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK5RAP2Q96SN8 AC108673.1-201ENST00000510422 1159 ntBASIC31.8■■■□□ 2.68
CDK5RAP2Q96SN8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDK5RAP2Q96SN8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDK5RAP2Q96SN8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.8■■■□□ 2.68
CDK5RAP2Q96SN8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CDK5RAP2Q96SN8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CDK5RAP2Q96SN8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CDK5RAP2Q96SN8 AL161658.1-201ENST00000623641 1967 ntBASIC31.78■■■□□ 2.68
CDK5RAP2Q96SN8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.78■■■□□ 2.68
CDK5RAP2Q96SN8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK5RAP2Q96SN8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.78■■■□□ 2.68
CDK5RAP2Q96SN8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDK5RAP2Q96SN8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CDK5RAP2Q96SN8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
CDK5RAP2Q96SN8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.76■■■□□ 2.68
CDK5RAP2Q96SN8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 MIR6090-201ENST00000622481 60 ntBASIC31.75■■■□□ 2.67
CDK5RAP2Q96SN8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDK5RAP2Q96SN8 HLA-V-202ENST00000446817 847 ntBASIC31.74■■■□□ 2.67
CDK5RAP2Q96SN8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDK5RAP2Q96SN8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.71■■■□□ 2.67
CDK5RAP2Q96SN8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDK5RAP2Q96SN8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDK5RAP2Q96SN8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CDK5RAP2Q96SN8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDK5RAP2Q96SN8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CDK5RAP2Q96SN8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDK5RAP2Q96SN8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDK5RAP2Q96SN8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.68■■■□□ 2.66
CDK5RAP2Q96SN8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDK5RAP2Q96SN8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDK5RAP2Q96SN8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.67■■■□□ 2.66
CDK5RAP2Q96SN8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDK5RAP2Q96SN8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDK5RAP2Q96SN8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK5RAP2Q96SN8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDK5RAP2Q96SN8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
CDK5RAP2Q96SN8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.65■■■□□ 2.66
CDK5RAP2Q96SN8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDK5RAP2Q96SN8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.65■■■□□ 2.66
CDK5RAP2Q96SN8 DUX4L29-201ENST00000425409 679 ntBASIC31.65■■■□□ 2.66
CDK5RAP2Q96SN8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK5RAP2Q96SN8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.64■■■□□ 2.66
CDK5RAP2Q96SN8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDK5RAP2Q96SN8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK5RAP2Q96SN8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDK5RAP2Q96SN8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDK5RAP2Q96SN8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CDK5RAP2Q96SN8 AC021231.2-201ENST00000594613 730 ntBASIC31.6■■■□□ 2.65
CDK5RAP2Q96SN8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK5RAP2Q96SN8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDK5RAP2Q96SN8 ZNRF2P2-203ENST00000454624 420 ntBASIC31.59■■■□□ 2.65
CDK5RAP2Q96SN8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CDK5RAP2Q96SN8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDK5RAP2Q96SN8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK5RAP2Q96SN8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK5RAP2Q96SN8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.58■■■□□ 2.65
CDK5RAP2Q96SN8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms