Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC44.96■■■■■ 4.79
CHMP7Q8WUX9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC44.95■■■■■ 4.79
CHMP7Q8WUX9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC44.95■■■■■ 4.79
CHMP7Q8WUX9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC44.93■■■■■ 4.78
CHMP7Q8WUX9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC44.93■■■■■ 4.78
CHMP7Q8WUX9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC44.92■■■■■ 4.78
CHMP7Q8WUX9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC44.92■■■■■ 4.78
CHMP7Q8WUX9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC44.92■■■■■ 4.78
CHMP7Q8WUX9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC44.91■■■■■ 4.78
CHMP7Q8WUX9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC44.9■■■■■ 4.78
CHMP7Q8WUX9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC44.9■■■■■ 4.78
CHMP7Q8WUX9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC44.87■■■■■ 4.77
CHMP7Q8WUX9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC44.86■■■■■ 4.77
CHMP7Q8WUX9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC44.86■■■■■ 4.77
CHMP7Q8WUX9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC44.83■■■■■ 4.77
CHMP7Q8WUX9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC44.83■■■■■ 4.77
CHMP7Q8WUX9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC44.82■■■■■ 4.77
CHMP7Q8WUX9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC44.82■■■■■ 4.77
CHMP7Q8WUX9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC44.81■■■■■ 4.76
CHMP7Q8WUX9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC44.81■■■■■ 4.76
CHMP7Q8WUX9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC44.8■■■■■ 4.76
CHMP7Q8WUX9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC44.79■■■■■ 4.76
CHMP7Q8WUX9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC44.79■■■■■ 4.76
CHMP7Q8WUX9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC44.77■■■■■ 4.76
CHMP7Q8WUX9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC44.77■■■■■ 4.76
CHMP7Q8WUX9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC44.77■■■■■ 4.76
CHMP7Q8WUX9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC44.76■■■■■ 4.76
CHMP7Q8WUX9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC44.76■■■■■ 4.76
CHMP7Q8WUX9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC44.74■■■■■ 4.75
CHMP7Q8WUX9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC44.74■■■■■ 4.75
CHMP7Q8WUX9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC44.73■■■■■ 4.75
CHMP7Q8WUX9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC44.72■■■■■ 4.75
CHMP7Q8WUX9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC44.69■■■■■ 4.74
CHMP7Q8WUX9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC44.66■■■■■ 4.74
CHMP7Q8WUX9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC44.66■■■■■ 4.74
CHMP7Q8WUX9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC44.66■■■■■ 4.74
CHMP7Q8WUX9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC44.65■■■■■ 4.74
CHMP7Q8WUX9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.74
CHMP7Q8WUX9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC44.62■■■■■ 4.73
CHMP7Q8WUX9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.73
CHMP7Q8WUX9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC44.62■■■■■ 4.73
CHMP7Q8WUX9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC44.62■■■■■ 4.73
CHMP7Q8WUX9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC44.62■■■■■ 4.73
CHMP7Q8WUX9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC44.61■■■■■ 4.73
CHMP7Q8WUX9 RARRES2P2-201ENST00000394842 485 ntBASIC44.6■■■■■ 4.73
CHMP7Q8WUX9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC44.6■■■■■ 4.73
CHMP7Q8WUX9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC44.59■■■■■ 4.73
CHMP7Q8WUX9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC44.58■■■■■ 4.73
CHMP7Q8WUX9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC44.56■■■■■ 4.72
CHMP7Q8WUX9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L13-201ENST00000554103 1267 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 ABHD17AP5-201ENST00000580133 923 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L15-201ENST00000611059 1267 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L23-201ENST00000615195 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L24-201ENST00000617576 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L22-201ENST00000618238 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L20-201ENST00000619712 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L21-201ENST00000622058 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L10-201ENST00000622460 1267 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 DUX4L25-201ENST00000624915 1269 ntBASIC44.53■■■■■ 4.72
CHMP7Q8WUX9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC44.51■■■■■ 4.72
CHMP7Q8WUX9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC44.51■■■■■ 4.72
CHMP7Q8WUX9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC44.5■■■■■ 4.72
CHMP7Q8WUX9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC44.5■■■■■ 4.71
CHMP7Q8WUX9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
CHMP7Q8WUX9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC44.49■■■■■ 4.71
CHMP7Q8WUX9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC44.48■■■■■ 4.71
CHMP7Q8WUX9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC44.47■■■■■ 4.71
CHMP7Q8WUX9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC44.47■■■■■ 4.71
CHMP7Q8WUX9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC44.47■■■■■ 4.71
CHMP7Q8WUX9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC44.45■■■■■ 4.71
CHMP7Q8WUX9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC44.45■■■■■ 4.71
CHMP7Q8WUX9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC44.45■■■■■ 4.71
CHMP7Q8WUX9 HES6-205ENST00000409356 528 ntTSL 2 BASIC44.44■■■■■ 4.7
CHMP7Q8WUX9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC44.44■■■■■ 4.7
CHMP7Q8WUX9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC44.44■■■■■ 4.7
CHMP7Q8WUX9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC44.44■■■■■ 4.7
CHMP7Q8WUX9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC44.41■■■■■ 4.7
CHMP7Q8WUX9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC44.41■■■■■ 4.7
CHMP7Q8WUX9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC44.4■■■■■ 4.7
CHMP7Q8WUX9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC44.39■■■■■ 4.7
CHMP7Q8WUX9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC44.38■■■■■ 4.7
CHMP7Q8WUX9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC44.38■■■■■ 4.7
CHMP7Q8WUX9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC44.38■■■■■ 4.69
CHMP7Q8WUX9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC44.38■■■■■ 4.69
CHMP7Q8WUX9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC44.37■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC44.34■■■■■ 4.69
CHMP7Q8WUX9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC44.33■■■■■ 4.69
CHMP7Q8WUX9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC44.31■■■■■ 4.68
CHMP7Q8WUX9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC44.31■■■■■ 4.68
CHMP7Q8WUX9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC44.31■■■■■ 4.68
CHMP7Q8WUX9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC44.3■■■■■ 4.68
CHMP7Q8WUX9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC44.3■■■■■ 4.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms