Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
TMC1Q8TDI8 ABHD17AP4-201ENST00000411545 909 ntBASIC37.24■■■■□ 3.55
TMC1Q8TDI8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
TMC1Q8TDI8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
TMC1Q8TDI8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
TMC1Q8TDI8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
TMC1Q8TDI8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
TMC1Q8TDI8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC37.21■■■■□ 3.55
TMC1Q8TDI8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
TMC1Q8TDI8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC37.2■■■■□ 3.55
TMC1Q8TDI8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC37.2■■■■□ 3.55
TMC1Q8TDI8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
TMC1Q8TDI8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
TMC1Q8TDI8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC37.19■■■■□ 3.54
TMC1Q8TDI8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
TMC1Q8TDI8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
TMC1Q8TDI8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC37.18■■■■□ 3.54
TMC1Q8TDI8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
TMC1Q8TDI8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC37.17■■■■□ 3.54
TMC1Q8TDI8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC37.16■■■■□ 3.54
TMC1Q8TDI8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
TMC1Q8TDI8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC37.16■■■■□ 3.54
TMC1Q8TDI8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.16■■■■□ 3.54
TMC1Q8TDI8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
TMC1Q8TDI8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC37.15■■■■□ 3.54
TMC1Q8TDI8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
TMC1Q8TDI8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
TMC1Q8TDI8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC37.14■■■■□ 3.54
TMC1Q8TDI8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC37.14■■■■□ 3.54
TMC1Q8TDI8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC37.13■■■■□ 3.53
TMC1Q8TDI8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC37.13■■■■□ 3.53
TMC1Q8TDI8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC37.13■■■■□ 3.53
TMC1Q8TDI8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
TMC1Q8TDI8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC37.1■■■■□ 3.53
TMC1Q8TDI8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC37.09■■■■□ 3.53
TMC1Q8TDI8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
TMC1Q8TDI8 MIR7108-201ENST00000614319 87 ntBASIC37.08■■■■□ 3.53
TMC1Q8TDI8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
TMC1Q8TDI8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC37.07■■■■□ 3.52
TMC1Q8TDI8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
TMC1Q8TDI8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
TMC1Q8TDI8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC37.04■■■■□ 3.52
TMC1Q8TDI8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC37.04■■■■□ 3.52
TMC1Q8TDI8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
TMC1Q8TDI8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
TMC1Q8TDI8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC37.03■■■■□ 3.52
TMC1Q8TDI8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC37.03■■■■□ 3.52
TMC1Q8TDI8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC37.02■■■■□ 3.52
TMC1Q8TDI8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
TMC1Q8TDI8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
TMC1Q8TDI8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
TMC1Q8TDI8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC37■■■■□ 3.51
TMC1Q8TDI8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
TMC1Q8TDI8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
TMC1Q8TDI8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
TMC1Q8TDI8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
TMC1Q8TDI8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.97■■■■□ 3.51
TMC1Q8TDI8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
TMC1Q8TDI8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC36.95■■■■□ 3.51
TMC1Q8TDI8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC36.95■■■■□ 3.51
TMC1Q8TDI8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
TMC1Q8TDI8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
TMC1Q8TDI8 MIR6090-201ENST00000622481 60 ntBASIC36.93■■■■□ 3.5
TMC1Q8TDI8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
TMC1Q8TDI8 ZNRF2P2-203ENST00000454624 420 ntBASIC36.92■■■■□ 3.5
TMC1Q8TDI8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC36.91■■■■□ 3.5
TMC1Q8TDI8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.91■■■■□ 3.5
TMC1Q8TDI8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC36.91■■■■□ 3.5
TMC1Q8TDI8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC36.91■■■■□ 3.5
TMC1Q8TDI8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
TMC1Q8TDI8 DUX4L29-201ENST00000425409 679 ntBASIC36.89■■■■□ 3.5
TMC1Q8TDI8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
TMC1Q8TDI8 AC108673.1-201ENST00000510422 1159 ntBASIC36.88■■■■□ 3.49
TMC1Q8TDI8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC36.88■■■■□ 3.49
TMC1Q8TDI8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
TMC1Q8TDI8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC36.87■■■■□ 3.49
TMC1Q8TDI8 AL161658.1-201ENST00000623641 1967 ntBASIC36.86■■■■□ 3.49
TMC1Q8TDI8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC36.84■■■■□ 3.49
TMC1Q8TDI8 AC021231.2-201ENST00000594613 730 ntBASIC36.84■■■■□ 3.49
TMC1Q8TDI8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC36.83■■■■□ 3.49
TMC1Q8TDI8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC36.81■■■■□ 3.48
TMC1Q8TDI8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC36.8■■■■□ 3.48
TMC1Q8TDI8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC36.8■■■■□ 3.48
TMC1Q8TDI8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
TMC1Q8TDI8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
TMC1Q8TDI8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
TMC1Q8TDI8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC36.78■■■■□ 3.48
TMC1Q8TDI8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC36.78■■■■□ 3.48
TMC1Q8TDI8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
TMC1Q8TDI8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
TMC1Q8TDI8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
TMC1Q8TDI8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
TMC1Q8TDI8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC36.77■■■■□ 3.48
TMC1Q8TDI8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC36.77■■■■□ 3.48
TMC1Q8TDI8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC36.77■■■■□ 3.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms