Protein–RNA interactions for Protein: Q8TCQ1

MARCH1, E3 ubiquitin-protein ligase MARCH1, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH1Q8TCQ1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MARCH1Q8TCQ1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MARCH1Q8TCQ1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MARCH1Q8TCQ1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MARCH1Q8TCQ1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MARCH1Q8TCQ1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.35■■□□□ 1.17
MARCH1Q8TCQ1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MARCH1Q8TCQ1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MARCH1Q8TCQ1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MARCH1Q8TCQ1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
MARCH1Q8TCQ1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
MARCH1Q8TCQ1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MARCH1Q8TCQ1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MARCH1Q8TCQ1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.32■■□□□ 1.16
MARCH1Q8TCQ1 AC142086.6-201ENST00000621154 1765 ntBASIC22.32■■□□□ 1.16
MARCH1Q8TCQ1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MARCH1Q8TCQ1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MARCH1Q8TCQ1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.31■■□□□ 1.16
MARCH1Q8TCQ1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MARCH1Q8TCQ1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MARCH1Q8TCQ1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MARCH1Q8TCQ1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MARCH1Q8TCQ1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MARCH1Q8TCQ1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MARCH1Q8TCQ1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.29■■□□□ 1.16
MARCH1Q8TCQ1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
MARCH1Q8TCQ1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MARCH1Q8TCQ1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
MARCH1Q8TCQ1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.27■■□□□ 1.16
MARCH1Q8TCQ1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.26■■□□□ 1.15
MARCH1Q8TCQ1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MARCH1Q8TCQ1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MARCH1Q8TCQ1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MARCH1Q8TCQ1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MARCH1Q8TCQ1 AL135925.1-201ENST00000605920 1701 ntBASIC22.24■■□□□ 1.15
MARCH1Q8TCQ1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
MARCH1Q8TCQ1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
MARCH1Q8TCQ1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MARCH1Q8TCQ1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MARCH1Q8TCQ1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MARCH1Q8TCQ1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
MARCH1Q8TCQ1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
MARCH1Q8TCQ1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.22■■□□□ 1.15
MARCH1Q8TCQ1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MARCH1Q8TCQ1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MARCH1Q8TCQ1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.2■■□□□ 1.14
MARCH1Q8TCQ1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
MARCH1Q8TCQ1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
MARCH1Q8TCQ1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MARCH1Q8TCQ1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
MARCH1Q8TCQ1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
MARCH1Q8TCQ1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MARCH1Q8TCQ1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MARCH1Q8TCQ1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
MARCH1Q8TCQ1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MARCH1Q8TCQ1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.16■■□□□ 1.14
MARCH1Q8TCQ1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
MARCH1Q8TCQ1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MARCH1Q8TCQ1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MARCH1Q8TCQ1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.14■■□□□ 1.13
MARCH1Q8TCQ1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MARCH1Q8TCQ1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.13■■□□□ 1.13
MARCH1Q8TCQ1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MARCH1Q8TCQ1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.13■■□□□ 1.13
MARCH1Q8TCQ1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MARCH1Q8TCQ1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MARCH1Q8TCQ1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
MARCH1Q8TCQ1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MARCH1Q8TCQ1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MARCH1Q8TCQ1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
MARCH1Q8TCQ1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
MARCH1Q8TCQ1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MARCH1Q8TCQ1 AC006077.2-201ENST00000623591 457 ntBASIC22.08■■□□□ 1.13
MARCH1Q8TCQ1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MARCH1Q8TCQ1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MARCH1Q8TCQ1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MARCH1Q8TCQ1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MARCH1Q8TCQ1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MARCH1Q8TCQ1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.05■■□□□ 1.12
MARCH1Q8TCQ1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 AL139393.2-201ENST00000608721 2025 ntBASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MARCH1Q8TCQ1 DRD5P2-201ENST00000421395 2012 ntBASIC22.03■■□□□ 1.12
MARCH1Q8TCQ1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MARCH1Q8TCQ1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
MARCH1Q8TCQ1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
MARCH1Q8TCQ1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MARCH1Q8TCQ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.02■■□□□ 1.11
MARCH1Q8TCQ1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MARCH1Q8TCQ1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MARCH1Q8TCQ1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MARCH1Q8TCQ1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MARCH1Q8TCQ1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22■■□□□ 1.11
MARCH1Q8TCQ1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MARCH1Q8TCQ1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
MARCH1Q8TCQ1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms