Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cuedc1Q8R3V6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Cuedc1Q8R3V6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cuedc1Q8R3V6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cuedc1Q8R3V6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.16■■□□□ 1.14
Cuedc1Q8R3V6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Cuedc1Q8R3V6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Cuedc1Q8R3V6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Cuedc1Q8R3V6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cuedc1Q8R3V6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
Cuedc1Q8R3V6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cuedc1Q8R3V6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cuedc1Q8R3V6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cuedc1Q8R3V6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cuedc1Q8R3V6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.1■■□□□ 1.13
Cuedc1Q8R3V6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cuedc1Q8R3V6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cuedc1Q8R3V6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cuedc1Q8R3V6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cuedc1Q8R3V6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cuedc1Q8R3V6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.06■■□□□ 1.12
Cuedc1Q8R3V6 Nkain2-201ENSMUST00000092602 558 ntBASIC22.06■■□□□ 1.12
Cuedc1Q8R3V6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cuedc1Q8R3V6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cuedc1Q8R3V6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cuedc1Q8R3V6 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.05■■□□□ 1.12
Cuedc1Q8R3V6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cuedc1Q8R3V6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cuedc1Q8R3V6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cuedc1Q8R3V6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cuedc1Q8R3V6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cuedc1Q8R3V6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cuedc1Q8R3V6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cuedc1Q8R3V6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cuedc1Q8R3V6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cuedc1Q8R3V6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cuedc1Q8R3V6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Cuedc1Q8R3V6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cuedc1Q8R3V6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cuedc1Q8R3V6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.96■■□□□ 1.11
Cuedc1Q8R3V6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.96■■□□□ 1.11
Cuedc1Q8R3V6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cuedc1Q8R3V6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cuedc1Q8R3V6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cuedc1Q8R3V6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cuedc1Q8R3V6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cuedc1Q8R3V6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cuedc1Q8R3V6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cuedc1Q8R3V6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cuedc1Q8R3V6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cuedc1Q8R3V6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cuedc1Q8R3V6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.91■■□□□ 1.1
Cuedc1Q8R3V6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cuedc1Q8R3V6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cuedc1Q8R3V6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cuedc1Q8R3V6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cuedc1Q8R3V6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cuedc1Q8R3V6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cuedc1Q8R3V6 Gm11599-201ENSMUST00000118720 878 ntBASIC21.88■■□□□ 1.09
Cuedc1Q8R3V6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cuedc1Q8R3V6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cuedc1Q8R3V6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.88■■□□□ 1.09
Cuedc1Q8R3V6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
Cuedc1Q8R3V6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cuedc1Q8R3V6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cuedc1Q8R3V6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cuedc1Q8R3V6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cuedc1Q8R3V6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cuedc1Q8R3V6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.84■■□□□ 1.09
Cuedc1Q8R3V6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.83■■□□□ 1.09
Cuedc1Q8R3V6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cuedc1Q8R3V6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cuedc1Q8R3V6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cuedc1Q8R3V6 Mir6538-201ENSMUST00000183713 110 ntBASIC21.82■■□□□ 1.08
Cuedc1Q8R3V6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cuedc1Q8R3V6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.81■■□□□ 1.08
Cuedc1Q8R3V6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cuedc1Q8R3V6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cuedc1Q8R3V6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cuedc1Q8R3V6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cuedc1Q8R3V6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cuedc1Q8R3V6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Cuedc1Q8R3V6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cuedc1Q8R3V6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms